Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-1Q9BYR8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 AC142381.3-201ENST00000568208 1670 ntBASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KRTAP3-1Q9BYR8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 AC138932.3-201ENST00000567634 1902 ntBASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
KRTAP3-1Q9BYR8 AC022211.4-201ENST00000625094 2161 ntBASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 AL139125.2-201ENST00000623134 1869 ntBASIC12.4□□□□□ -0.42
KRTAP3-1Q9BYR8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KRTAP3-1Q9BYR8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KRTAP3-1Q9BYR8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC12.38□□□□□ -0.43
KRTAP3-1Q9BYR8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 MIR3665-201ENST00000578708 105 ntBASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KRTAP3-1Q9BYR8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms