Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.92■□□□□ 0.94
NICN1Q9BSH3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NICN1Q9BSH3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.91■□□□□ 0.94
NICN1Q9BSH3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NICN1Q9BSH3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.91■□□□□ 0.94
NICN1Q9BSH3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NICN1Q9BSH3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NICN1Q9BSH3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NICN1Q9BSH3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NICN1Q9BSH3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.89■□□□□ 0.94
NICN1Q9BSH3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NICN1Q9BSH3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NICN1Q9BSH3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
NICN1Q9BSH3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NICN1Q9BSH3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
NICN1Q9BSH3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NICN1Q9BSH3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.89■□□□□ 0.93
NICN1Q9BSH3 AC044849.2-201ENST00000606596 710 ntBASIC20.89■□□□□ 0.93
NICN1Q9BSH3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.89■□□□□ 0.93
NICN1Q9BSH3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.89■□□□□ 0.93
NICN1Q9BSH3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NICN1Q9BSH3 ERN1-208ENST00000606895 2068 ntBASIC20.87■□□□□ 0.93
NICN1Q9BSH3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NICN1Q9BSH3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NICN1Q9BSH3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NICN1Q9BSH3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NICN1Q9BSH3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NICN1Q9BSH3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NICN1Q9BSH3 AC021231.2-201ENST00000594613 730 ntBASIC20.85■□□□□ 0.93
NICN1Q9BSH3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NICN1Q9BSH3 AC093323.1-202ENST00000635031 2045 ntBASIC20.85■□□□□ 0.93
NICN1Q9BSH3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NICN1Q9BSH3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NICN1Q9BSH3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NICN1Q9BSH3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.83■□□□□ 0.93
NICN1Q9BSH3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NICN1Q9BSH3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NICN1Q9BSH3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NICN1Q9BSH3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NICN1Q9BSH3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NICN1Q9BSH3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.81■□□□□ 0.92
NICN1Q9BSH3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NICN1Q9BSH3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NICN1Q9BSH3 AC010501.1-201ENST00000606270 1962 ntBASIC20.81■□□□□ 0.92
NICN1Q9BSH3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NICN1Q9BSH3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NICN1Q9BSH3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.8■□□□□ 0.92
NICN1Q9BSH3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.8■□□□□ 0.92
NICN1Q9BSH3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NICN1Q9BSH3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NICN1Q9BSH3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
NICN1Q9BSH3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NICN1Q9BSH3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.78■□□□□ 0.92
NICN1Q9BSH3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NICN1Q9BSH3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NICN1Q9BSH3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NICN1Q9BSH3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NICN1Q9BSH3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NICN1Q9BSH3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NICN1Q9BSH3 DUX4L29-201ENST00000425409 679 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms