Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.21■□□□□ 0.99
GFI1Q99684 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GFI1Q99684 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GFI1Q99684 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
GFI1Q99684 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.2■□□□□ 0.98
GFI1Q99684 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.19■□□□□ 0.98
GFI1Q99684 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GFI1Q99684 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GFI1Q99684 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GFI1Q99684 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.19■□□□□ 0.98
GFI1Q99684 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GFI1Q99684 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.18■□□□□ 0.98
GFI1Q99684 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.18■□□□□ 0.98
GFI1Q99684 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GFI1Q99684 AC138932.3-201ENST00000567634 1902 ntBASIC21.17■□□□□ 0.98
GFI1Q99684 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GFI1Q99684 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.17■□□□□ 0.98
GFI1Q99684 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GFI1Q99684 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GFI1Q99684 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GFI1Q99684 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GFI1Q99684 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.16■□□□□ 0.98
GFI1Q99684 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.16■□□□□ 0.98
GFI1Q99684 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GFI1Q99684 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.15■□□□□ 0.98
GFI1Q99684 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GFI1Q99684 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GFI1Q99684 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GFI1Q99684 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GFI1Q99684 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GFI1Q99684 AL139125.2-201ENST00000623134 1869 ntBASIC21.15■□□□□ 0.98
GFI1Q99684 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
GFI1Q99684 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GFI1Q99684 AC022211.4-201ENST00000625094 2161 ntBASIC21.14■□□□□ 0.98
GFI1Q99684 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GFI1Q99684 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GFI1Q99684 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GFI1Q99684 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GFI1Q99684 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GFI1Q99684 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.13■□□□□ 0.97
GFI1Q99684 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GFI1Q99684 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GFI1Q99684 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GFI1Q99684 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GFI1Q99684 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GFI1Q99684 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.12■□□□□ 0.97
GFI1Q99684 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
GFI1Q99684 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GFI1Q99684 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GFI1Q99684 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GFI1Q99684 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.11■□□□□ 0.97
GFI1Q99684 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.11■□□□□ 0.97
GFI1Q99684 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GFI1Q99684 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GFI1Q99684 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
GFI1Q99684 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
GFI1Q99684 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
GFI1Q99684 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GFI1Q99684 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GFI1Q99684 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
GFI1Q99684 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GFI1Q99684 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GFI1Q99684 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.1■□□□□ 0.97
GFI1Q99684 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
GFI1Q99684 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GFI1Q99684 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GFI1Q99684 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.09■□□□□ 0.97
GFI1Q99684 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.09■□□□□ 0.97
GFI1Q99684 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GFI1Q99684 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.09■□□□□ 0.97
GFI1Q99684 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.09■□□□□ 0.97
GFI1Q99684 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GFI1Q99684 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GFI1Q99684 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.09■□□□□ 0.97
GFI1Q99684 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
GFI1Q99684 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GFI1Q99684 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GFI1Q99684 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GFI1Q99684 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.08■□□□□ 0.97
GFI1Q99684 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.08■□□□□ 0.96
GFI1Q99684 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.08■□□□□ 0.96
GFI1Q99684 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GFI1Q99684 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GFI1Q99684 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GFI1Q99684 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GFI1Q99684 AC096887.2-201ENST00000623443 1957 ntBASIC21.07■□□□□ 0.96
GFI1Q99684 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms