Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RARRES2P7-201ENST00000567349 469 ntBASIC21.1■□□□□ 0.97
CMTM3Q96MX0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.1■□□□□ 0.97
CMTM3Q96MX0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.1■□□□□ 0.97
CMTM3Q96MX0 AC022211.4-201ENST00000625094 2161 ntBASIC21.1■□□□□ 0.97
CMTM3Q96MX0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 WHAMMP3-201ENST00000611636 1609 ntBASIC21.09■□□□□ 0.97
CMTM3Q96MX0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.09■□□□□ 0.97
CMTM3Q96MX0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.08■□□□□ 0.97
CMTM3Q96MX0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CMTM3Q96MX0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CMTM3Q96MX0 AC138932.3-201ENST00000567634 1902 ntBASIC21.08■□□□□ 0.96
CMTM3Q96MX0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.07■□□□□ 0.96
CMTM3Q96MX0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CMTM3Q96MX0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CMTM3Q96MX0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CMTM3Q96MX0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CMTM3Q96MX0 AC012676.1-201ENST00000574705 1949 ntBASIC21.07■□□□□ 0.96
CMTM3Q96MX0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CMTM3Q96MX0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CMTM3Q96MX0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CMTM3Q96MX0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CMTM3Q96MX0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CMTM3Q96MX0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.05■□□□□ 0.96
CMTM3Q96MX0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CMTM3Q96MX0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.04■□□□□ 0.96
CMTM3Q96MX0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.04■□□□□ 0.96
CMTM3Q96MX0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CMTM3Q96MX0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CMTM3Q96MX0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CMTM3Q96MX0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.03■□□□□ 0.96
CMTM3Q96MX0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CMTM3Q96MX0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CMTM3Q96MX0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.03■□□□□ 0.96
CMTM3Q96MX0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CMTM3Q96MX0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CMTM3Q96MX0 CAHM-201ENST00000604200 896 ntBASIC21.02■□□□□ 0.96
CMTM3Q96MX0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.02■□□□□ 0.96
CMTM3Q96MX0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CMTM3Q96MX0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CMTM3Q96MX0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.02■□□□□ 0.96
CMTM3Q96MX0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CMTM3Q96MX0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CMTM3Q96MX0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CMTM3Q96MX0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CMTM3Q96MX0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CMTM3Q96MX0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CMTM3Q96MX0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.01■□□□□ 0.95
CMTM3Q96MX0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CMTM3Q96MX0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CMTM3Q96MX0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CMTM3Q96MX0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CMTM3Q96MX0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CMTM3Q96MX0 AC108673.1-201ENST00000510422 1159 ntBASIC20.98■□□□□ 0.95
CMTM3Q96MX0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.98■□□□□ 0.95
CMTM3Q96MX0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CMTM3Q96MX0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CMTM3Q96MX0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CMTM3Q96MX0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CMTM3Q96MX0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CMTM3Q96MX0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CMTM3Q96MX0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.96■□□□□ 0.95
CMTM3Q96MX0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CMTM3Q96MX0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CMTM3Q96MX0 MIR762-201ENST00000390236 83 ntBASIC20.95■□□□□ 0.94
CMTM3Q96MX0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CMTM3Q96MX0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CMTM3Q96MX0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms