Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ERN1-208ENST00000606895 2068 ntBASIC22.01■■□□□ 1.11
BBS1Q8NFJ9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
BBS1Q8NFJ9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.01■■□□□ 1.11
BBS1Q8NFJ9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BBS1Q8NFJ9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22■■□□□ 1.11
BBS1Q8NFJ9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
BBS1Q8NFJ9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22■■□□□ 1.11
BBS1Q8NFJ9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BBS1Q8NFJ9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
BBS1Q8NFJ9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BBS1Q8NFJ9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
BBS1Q8NFJ9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
BBS1Q8NFJ9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
BBS1Q8NFJ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BBS1Q8NFJ9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BBS1Q8NFJ9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BBS1Q8NFJ9 AC093323.1-202ENST00000635031 2045 ntBASIC21.97■■□□□ 1.11
BBS1Q8NFJ9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BBS1Q8NFJ9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BBS1Q8NFJ9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.97■■□□□ 1.11
BBS1Q8NFJ9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.97■■□□□ 1.11
BBS1Q8NFJ9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BBS1Q8NFJ9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.96■■□□□ 1.11
BBS1Q8NFJ9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.95■■□□□ 1.1
BBS1Q8NFJ9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
BBS1Q8NFJ9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BBS1Q8NFJ9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BBS1Q8NFJ9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BBS1Q8NFJ9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BBS1Q8NFJ9 AC010501.1-201ENST00000606270 1962 ntBASIC21.93■■□□□ 1.1
BBS1Q8NFJ9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BBS1Q8NFJ9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BBS1Q8NFJ9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BBS1Q8NFJ9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BBS1Q8NFJ9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.91■■□□□ 1.1
BBS1Q8NFJ9 DUX4L29-201ENST00000425409 679 ntBASIC21.91■■□□□ 1.1
BBS1Q8NFJ9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.91■■□□□ 1.1
BBS1Q8NFJ9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.91■■□□□ 1.1
BBS1Q8NFJ9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BBS1Q8NFJ9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
BBS1Q8NFJ9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BBS1Q8NFJ9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BBS1Q8NFJ9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BBS1Q8NFJ9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.88■■□□□ 1.09
BBS1Q8NFJ9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BBS1Q8NFJ9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.88■■□□□ 1.09
BBS1Q8NFJ9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.88■■□□□ 1.09
BBS1Q8NFJ9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.87■■□□□ 1.09
BBS1Q8NFJ9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BBS1Q8NFJ9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.87■■□□□ 1.09
BBS1Q8NFJ9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
BBS1Q8NFJ9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.86■■□□□ 1.09
BBS1Q8NFJ9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BBS1Q8NFJ9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BBS1Q8NFJ9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.85■■□□□ 1.09
BBS1Q8NFJ9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
BBS1Q8NFJ9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
BBS1Q8NFJ9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BBS1Q8NFJ9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BBS1Q8NFJ9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
BBS1Q8NFJ9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
BBS1Q8NFJ9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.83■■□□□ 1.09
BBS1Q8NFJ9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BBS1Q8NFJ9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.82■■□□□ 1.08
BBS1Q8NFJ9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BBS1Q8NFJ9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
BBS1Q8NFJ9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BBS1Q8NFJ9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms