Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.172e-6■■■■□ 25.6
PHF6Q8IWS0 UNKL-206ENST00000402641 669 ntTSL 322.12■■□□□ 1.131e-6■■■■□ 25.6
PHF6Q8IWS0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.58■□□□□ 0.721e-6■■■■□ 25.6
PHF6Q8IWS0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.371e-6■■■■□ 25.6
PHF6Q8IWS0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.85□□□□□ -0.031e-6■■■■□ 25.6
PHF6Q8IWS0 UNKL-207ENST00000403703 4281 ntTSL 1 (best)12.64□□□□□ -0.391e-6■■■■□ 25.6
PHF6Q8IWS0 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.51e-6■■■■□ 25.6
PHF6Q8IWS0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.452e-6■■■■□ 25.6
PHF6Q8IWS0 DGCR8-204ENST00000457069 770 ntTSL 322.85■■□□□ 1.258e-9■■■■□ 25.5
PHF6Q8IWS0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.268e-9■■■■□ 25.5
PHF6Q8IWS0 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC11.95□□□□□ -0.58e-9■■■■□ 25.5
PHF6Q8IWS0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.285e-7■■■■□ 25.5
PHF6Q8IWS0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.235e-7■■■■□ 25.5
PHF6Q8IWS0 PHRF1-206ENST00000534320 5178 ntTSL 516.45■□□□□ 0.225e-7■■■■□ 25.5
PHF6Q8IWS0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.165e-7■■■■□ 25.5
PHF6Q8IWS0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.055e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-208ENST00000472711 787 ntTSL 322.14■■□□□ 1.137e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-207ENST00000468235 594 ntTSL 1 (best)21.66■■□□□ 1.067e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-204ENST00000520751 577 ntTSL 321.45■■□□□ 1.027e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.83■□□□□ 0.937e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.857e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-210ENST00000478385 935 ntTSL 219.75■□□□□ 0.757e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.727e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.647e-7■■■■□ 25.5
PHF6Q8IWS0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.31■□□□□ 0.527e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.3■□□□□ 0.527e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.487e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.437e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.47e-7■■■■□ 25.5
PHF6Q8IWS0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.397e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-203ENST00000517291 1023 ntTSL 1 (best)17.39■□□□□ 0.377e-7■■■■□ 25.5
PHF6Q8IWS0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.328e-10■■■■□ 25.5
PHF6Q8IWS0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.277e-7■■■■□ 25.5
PHF6Q8IWS0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.247e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.27e-7■■■■□ 25.5
PHF6Q8IWS0 ADAMTSL4-205ENST00000483335 1826 ntTSL 1 (best)16.24■□□□□ 0.197e-7■■■■□ 25.5
PHF6Q8IWS0 PRG2-203ENST00000530105 1048 ntTSL 515.88■□□□□ 0.137e-7■■■■□ 25.5
PHF6Q8IWS0 ZGPAT-209ENST00000477340 2831 ntTSL 215.78■□□□□ 0.127e-7■■■■□ 25.5
PHF6Q8IWS0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.48■□□□□ 0.077e-7■■■■□ 25.5
PHF6Q8IWS0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.45■□□□□ 0.067e-7■■■■□ 25.5
PHF6Q8IWS0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.44■□□□□ 0.067e-7■■■■□ 25.5
PHF6Q8IWS0 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.027e-7■■■■□ 25.5
PHF6Q8IWS0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.067e-7■■■■□ 25.5
PHF6Q8IWS0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.087e-7■■■■□ 25.5
PHF6Q8IWS0 PDE4A-208ENST00000591971 836 ntTSL 514.32□□□□□ -0.127e-7■■■■□ 25.5
PHF6Q8IWS0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.197e-7■■■■□ 25.5
PHF6Q8IWS0 AP000781.2-201ENST00000534081 1639 ntTSL 213.53□□□□□ -0.247e-7■■■■□ 25.5
PHF6Q8IWS0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.267e-7■■■■□ 25.5
PHF6Q8IWS0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.287e-7■■■■□ 25.5
PHF6Q8IWS0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.297e-7■■■■□ 25.5
PHF6Q8IWS0 PRG2-204ENST00000533605 1350 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.317e-7■■■■□ 25.5
PHF6Q8IWS0 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.397e-7■■■■□ 25.5
PHF6Q8IWS0 UCKL1-205ENST00000483710 524 ntTSL 312.25□□□□□ -0.457e-7■■■■□ 25.5
PHF6Q8IWS0 RNA5SP211-201ENST00000365516 117 ntBASIC5.82□□□□□ -1.487e-7■■■■□ 25.5
PHF6Q8IWS0 LTBP4-223ENST00000598717 811 ntTSL 519.64■□□□□ 0.732e-8■■■■□ 25.4
PHF6Q8IWS0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.52e-8■■■■□ 25.4
PHF6Q8IWS0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.282e-8■■■■□ 25.4
PHF6Q8IWS0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.172e-8■■■■□ 25.4
PHF6Q8IWS0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.836e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.82■■□□□ 1.246e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.1■■□□□ 1.136e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-207ENST00000478180 963 ntTSL 521.94■■□□□ 1.16e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.45■■□□□ 1.026e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-204ENST00000421787 1924 ntTSL 220.14■□□□□ 0.816e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-201ENST00000028008 1220 ntTSL 519.52■□□□□ 0.726e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.646e-7■■■■□ 25.4
PHF6Q8IWS0 RNASET2-202ENST00000358165 2445 ntTSL 215.85■□□□□ 0.136e-7■■■■□ 25.4
PHF6Q8IWS0 AC007952.4-201ENST00000573866 637 ntBASIC15.5■□□□□ 0.072e-9■■■■□ 25.4
PHF6Q8IWS0 SNORD3D-202ENST00000630092 217 ntBASIC11.52□□□□□ -0.572e-9■■■■□ 25.4
PHF6Q8IWS0 SNORD3D-201ENST00000619178 218 ntBASIC11.18□□□□□ -0.622e-9■■■■□ 25.4
PHF6Q8IWS0 BSG-212ENST00000590218 545 ntTSL 221.33■■□□□ 1.013e-7■■■■□ 25.3
PHF6Q8IWS0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.18■□□□□ 0.182e-6■■■■□ 25.3
PHF6Q8IWS0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.222e-6■■■■□ 25.3
PHF6Q8IWS0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.222e-6■■■■□ 25.3
PHF6Q8IWS0 TRRAP-203ENST00000417523 550 ntTSL 420.13■□□□□ 0.815e-28■■■■□ 25.3
PHF6Q8IWS0 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.325e-28■■■■□ 25.3
PHF6Q8IWS0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.335e-28■■■■□ 25.3
PHF6Q8IWS0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.345e-28■■■■□ 25.3
PHF6Q8IWS0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.495e-28■■■■□ 25.3
PHF6Q8IWS0 ELF2-209ENST00000511184 1766 ntTSL 528.02■■■□□ 2.082e-6■■■■□ 25.3
PHF6Q8IWS0 ELF2-208ENST00000511006 1434 ntTSL 1 (best)27.83■■■□□ 2.052e-6■■■■□ 25.3
PHF6Q8IWS0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.172e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.03■□□□□ 0.324e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.77■□□□□ 0.114e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.66■□□□□ 0.14e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.074e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.064e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.17■□□□□ 0.024e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.17■□□□□ 0.024e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.144e-6■■■■□ 25.3
PHF6Q8IWS0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.85□□□□□ -0.194e-6■■■■□ 25.3
PHF6Q8IWS0 SLCO5A1-204ENST00000526750 2650 ntTSL 521.44■■□□□ 1.026e-7■■■■□ 25.1
PHF6Q8IWS0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.53■□□□□ 0.246e-7■■■■□ 25.1
PHF6Q8IWS0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.55■□□□□ 0.086e-7■■■■□ 25.1
PHF6Q8IWS0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.086e-7■■■■□ 25.1
PHF6Q8IWS0 SEPT5-205ENST00000412544 1108 ntTSL 518.88■□□□□ 0.619e-7■■■■□ 25.1
PHF6Q8IWS0 SEPT5-208ENST00000431124 920 ntTSL 516.9■□□□□ 0.39e-7■■■■□ 25.1
PHF6Q8IWS0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.222e-6■■■■□ 25.1
PHF6Q8IWS0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.39■■□□□ 1.012e-6■■■■□ 25.1
PHF6Q8IWS0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.22■□□□□ 0.993e-6■■■■□ 25.1
Retrieved 100 of 4,170 protein–RNA pairs in 92.5 ms