Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC28Q86X40 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC28Q86X40 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC28Q86X40 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC28Q86X40 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC28Q86X40 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.65■■□□□ 1.06
LRRC28Q86X40 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC28Q86X40 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.65■■□□□ 1.06
LRRC28Q86X40 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC28Q86X40 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC28Q86X40 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRRC28Q86X40 MIR3648-2-201ENST00000581792 180 ntBASIC21.64■■□□□ 1.05
LRRC28Q86X40 MIR3648-1-201ENST00000615959 180 ntBASIC21.64■■□□□ 1.05
LRRC28Q86X40 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRC28Q86X40 HLA-V-202ENST00000446817 847 ntBASIC21.63■■□□□ 1.05
LRRC28Q86X40 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC28Q86X40 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC28Q86X40 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC28Q86X40 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC28Q86X40 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC28Q86X40 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L13-201ENST00000554103 1267 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L15-201ENST00000611059 1267 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L23-201ENST00000615195 1269 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L24-201ENST00000617576 1269 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L22-201ENST00000618238 1269 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L20-201ENST00000619712 1269 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L21-201ENST00000622058 1269 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L10-201ENST00000622460 1267 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 DUX4L25-201ENST00000624915 1269 ntBASIC21.62■■□□□ 1.05
LRRC28Q86X40 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.62■■□□□ 1.05
LRRC28Q86X40 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC28Q86X40 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRC28Q86X40 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRC28Q86X40 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRC28Q86X40 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC28Q86X40 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
LRRC28Q86X40 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC28Q86X40 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC28Q86X40 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.6■■□□□ 1.05
LRRC28Q86X40 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRC28Q86X40 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.6■■□□□ 1.05
LRRC28Q86X40 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LRRC28Q86X40 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.6■■□□□ 1.05
LRRC28Q86X40 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC28Q86X40 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRC28Q86X40 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRC28Q86X40 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC28Q86X40 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
LRRC28Q86X40 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC28Q86X40 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC28Q86X40 AC135983.2-203ENST00000454486 1613 ntBASIC21.58■■□□□ 1.05
LRRC28Q86X40 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC28Q86X40 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
LRRC28Q86X40 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC28Q86X40 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRC28Q86X40 AC016575.1-201ENST00000607026 382 ntBASIC21.58■■□□□ 1.05
LRRC28Q86X40 CR559946.2-201ENST00000623684 991 ntBASIC21.58■■□□□ 1.05
LRRC28Q86X40 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LRRC28Q86X40 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LRRC28Q86X40 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LRRC28Q86X40 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC28Q86X40 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
LRRC28Q86X40 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC28Q86X40 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRC28Q86X40 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC28Q86X40 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC28Q86X40 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRC28Q86X40 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC28Q86X40 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC28Q86X40 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC28Q86X40 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC28Q86X40 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC28Q86X40 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC28Q86X40 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
LRRC28Q86X40 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC28Q86X40 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRC28Q86X40 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LRRC28Q86X40 MIR639-201ENST00000384974 98 ntBASIC21.55■■□□□ 1.04
LRRC28Q86X40 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC28Q86X40 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC28Q86X40 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC28Q86X40 ERN1-208ENST00000606895 2068 ntBASIC21.54■■□□□ 1.04
LRRC28Q86X40 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC28Q86X40 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC28Q86X40 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC28Q86X40 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.54■■□□□ 1.04
LRRC28Q86X40 WHAMMP2-203ENST00000563942 1603 ntBASIC21.54■■□□□ 1.04
LRRC28Q86X40 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC28Q86X40 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC28Q86X40 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC28Q86X40 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms