Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SETD8P1-201ENST00000623146 1180 ntBASIC19.61■□□□□ 0.73
TMEM88Q6PEY1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88Q6PEY1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88Q6PEY1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88Q6PEY1 AC092803.2-201ENST00000564287 1899 ntBASIC19.59■□□□□ 0.73
TMEM88Q6PEY1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88Q6PEY1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM88Q6PEY1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM88Q6PEY1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEM88Q6PEY1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88Q6PEY1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.58■□□□□ 0.73
TMEM88Q6PEY1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88Q6PEY1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM88Q6PEY1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.58■□□□□ 0.72
TMEM88Q6PEY1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.58■□□□□ 0.72
TMEM88Q6PEY1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM88Q6PEY1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
TMEM88Q6PEY1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 AL024507.2-201ENST00000606070 2574 ntBASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM88Q6PEY1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM88Q6PEY1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 AC097358.2-201ENST00000607541 1159 ntBASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM88Q6PEY1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM88Q6PEY1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM88Q6PEY1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88Q6PEY1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM88Q6PEY1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88Q6PEY1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88Q6PEY1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM88Q6PEY1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88Q6PEY1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88Q6PEY1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM88Q6PEY1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM88Q6PEY1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM88Q6PEY1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TMEM88Q6PEY1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 AL139125.2-201ENST00000623134 1869 ntBASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM88Q6PEY1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM88Q6PEY1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TMEM88Q6PEY1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM88Q6PEY1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM88Q6PEY1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM88Q6PEY1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88Q6PEY1 AC136428.2-201ENST00000563187 214 ntBASIC19.48■□□□□ 0.71
TMEM88Q6PEY1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88Q6PEY1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM88Q6PEY1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM88Q6PEY1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM88Q6PEY1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88Q6PEY1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88Q6PEY1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM88Q6PEY1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM88Q6PEY1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM88Q6PEY1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms