Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 SKN1YGR143W 2316 nt5.78□□□□□ -1.48
SDO1Q07953 STS1YIR011C 960 nt5.78□□□□□ -1.48
SDO1Q07953 YJL213WYJL213W 996 nt5.78□□□□□ -1.48
SDO1Q07953 PAU19YMR325W 375 nt5.78□□□□□ -1.48
SDO1Q07953 ERV2YPR037C 591 nt5.78□□□□□ -1.48
SDO1Q07953 YPR204WYPR204W 3099 nt5.78□□□□□ -1.48
SDO1Q07953 SPR1YOR190W 1338 nt5.77□□□□□ -1.49
SDO1Q07953 GPT2YKR067W 2232 nt5.77□□□□□ -1.49
SDO1Q07953 URH1YDR400W 1023 nt5.77□□□□□ -1.49
SDO1Q07953 PPM1YDR435C 987 nt5.77□□□□□ -1.49
SDO1Q07953 GEF1YJR040W 2340 nt5.77□□□□□ -1.49
SDO1Q07953 VHT1YGR065C 1782 nt5.77□□□□□ -1.49
SDO1Q07953 SUB2YDL084W 1341 nt5.76□□□□□ -1.49
SDO1Q07953 DUG1YFR044C 1446 nt5.76□□□□□ -1.49
SDO1Q07953 STE13YOR219C 2796 nt5.76□□□□□ -1.49
SDO1Q07953 SEN2YLR105C 1134 nt5.76□□□□□ -1.49
SDO1Q07953 DPM1YPR183W 804 nt5.76□□□□□ -1.49
SDO1Q07953 TPO3YPR156C 1869 nt5.76□□□□□ -1.49
SDO1Q07953 TFC6YDR362C 2019 nt5.75□□□□□ -1.49
SDO1Q07953 TKL1YPR074C 2043 nt5.75□□□□□ -1.49
SDO1Q07953 PSP2YML017W 1782 nt5.75□□□□□ -1.49
SDO1Q07953 PNS1YOR161C 1620 nt5.75□□□□□ -1.49
SDO1Q07953 TRS31YDR472W 852 nt5.75□□□□□ -1.49
SDO1Q07953 RDL2YOR286W 450 nt5.75□□□□□ -1.49
SDO1Q07953 OPT1YJL212C 2400 nt5.75□□□□□ -1.49
SDO1Q07953 PAP2YOL115W 1755 nt5.75□□□□□ -1.49
SDO1Q07953 YPT1YFL038C 621 nt5.74□□□□□ -1.49
SDO1Q07953 TDH1YJL052W 999 nt5.74□□□□□ -1.49
SDO1Q07953 FAT3YKL187C 2253 nt5.74□□□□□ -1.49
SDO1Q07953 YDL177CYDL177C 513 nt5.73□□□□□ -1.49
SDO1Q07953 CPT1YNL130C 1182 nt5.73□□□□□ -1.49
SDO1Q07953 IME2YJL106W 1938 nt5.73□□□□□ -1.49
SDO1Q07953 PAT1YCR077C 2391 nt5.73□□□□□ -1.49
SDO1Q07953 HEM1YDR232W 1647 nt5.73□□□□□ -1.49
SDO1Q07953 ADA2YDR448W 1305 nt5.73□□□□□ -1.49
SDO1Q07953 PMT3YOR321W 2262 nt5.72□□□□□ -1.49
SDO1Q07953 GPI11YDR302W 660 nt5.72□□□□□ -1.49
SDO1Q07953 CBR1YIL043C 855 nt5.72□□□□□ -1.49
SDO1Q07953 DUS4YLR405W 1104 nt5.72□□□□□ -1.49
SDO1Q07953 IRC11YOR013W 471 nt5.72□□□□□ -1.49
SDO1Q07953 ELP3YPL086C 1674 nt5.72□□□□□ -1.49
SDO1Q07953 KTR5YNL029C 1569 nt5.72□□□□□ -1.49
SDO1Q07953 QNS1YHR074W 2145 nt5.71□□□□□ -1.5
SDO1Q07953 YML6YML025C 861 nt5.71□□□□□ -1.5
SDO1Q07953 UTR2YEL040W 1404 nt5.71□□□□□ -1.5
SDO1Q07953 EIS1YMR031C 2532 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)BtG(GCC)B 71 nt5.7□□□□□ -1.5
SDO1Q07953 SUF16tG(GCC)C 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)D1tG(GCC)D1 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)D2tG(GCC)D2 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)EtG(GCC)E 71 nt5.7□□□□□ -1.5
SDO1Q07953 SUF20tG(GCC)F1 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)F2tG(GCC)F2 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)G1tG(GCC)G1 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)G2tG(GCC)G2 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)J1tG(GCC)J1 71 nt5.7□□□□□ -1.5
SDO1Q07953 SUF23tG(GCC)J2 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)MtG(GCC)M 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)O1tG(GCC)O1 71 nt5.7□□□□□ -1.5
SDO1Q07953 SUF17tG(GCC)O2 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)P1tG(GCC)P1 71 nt5.7□□□□□ -1.5
SDO1Q07953 tG(GCC)P2tG(GCC)P2 71 nt5.7□□□□□ -1.5
SDO1Q07953 HAC1YFL031W 717 nt5.7□□□□□ -1.5
SDO1Q07953 YMR007WYMR007W 381 nt5.7□□□□□ -1.5
SDO1Q07953 HST2YPL015C 1074 nt5.7□□□□□ -1.5
SDO1Q07953 TFB4YPR056W 1017 nt5.7□□□□□ -1.5
SDO1Q07953 SAC6YDR129C 1929 nt5.7□□□□□ -1.5
SDO1Q07953 CHL4YDR254W 1377 nt5.69□□□□□ -1.5
SDO1Q07953 CRZ1YNL027W 2037 nt5.69□□□□□ -1.5
SDO1Q07953 YCP4YCR004C 744 nt5.69□□□□□ -1.5
SDO1Q07953 COX9YDL067C 180 nt5.69□□□□□ -1.5
SDO1Q07953 PIL1YGR086C 1020 nt5.69□□□□□ -1.5
SDO1Q07953 RSA4YCR072C 1548 nt5.69□□□□□ -1.5
SDO1Q07953 CRP1YHR146W 1398 nt5.68□□□□□ -1.5
SDO1Q07953 HRB1YNL004W 1365 nt5.68□□□□□ -1.5
SDO1Q07953 CSC1YLR241W 2349 nt5.68□□□□□ -1.5
SDO1Q07953 NTE1YML059C 5040 nt5.68□□□□□ -1.5
SDO1Q07953 MIP1YOR330C 3765 nt5.68□□□□□ -1.5
SDO1Q07953 YJR142WYJR142W 1029 nt5.68□□□□□ -1.5
SDO1Q07953 ELP4YPL101W 1371 nt5.67□□□□□ -1.5
SDO1Q07953 RGD1YBR260C 2001 nt5.67□□□□□ -1.5
SDO1Q07953 GEX1YCL073C 1848 nt5.67□□□□□ -1.5
SDO1Q07953 GEX2YKR106W 1848 nt5.67□□□□□ -1.5
SDO1Q07953 FAF1YIL019W 1041 nt5.67□□□□□ -1.5
SDO1Q07953 FBA1YKL060C 1080 nt5.67□□□□□ -1.5
SDO1Q07953 RMA1YKL132C 1293 nt5.67□□□□□ -1.5
SDO1Q07953 PAM17YKR065C 594 nt5.67□□□□□ -1.5
SDO1Q07953 MOD5YOR274W 1287 nt5.67□□□□□ -1.5
SDO1Q07953 YMR034CYMR034C 1305 nt5.67□□□□□ -1.5
SDO1Q07953 CCC2YDR270W 3015 nt5.66□□□□□ -1.5
SDO1Q07953 YOL036WYOL036W 2286 nt5.66□□□□□ -1.5
SDO1Q07953 YDL023CYDL023C 321 nt5.66□□□□□ -1.5
SDO1Q07953 SOH1YGL127C 384 nt5.66□□□□□ -1.5
SDO1Q07953 NCA3YJL116C 1014 nt5.66□□□□□ -1.5
SDO1Q07953 RPL31BYLR406C 342 nt5.66□□□□□ -1.5
SDO1Q07953 GUP2YPL189W 1830 nt5.65□□□□□ -1.5
SDO1Q07953 SET5YHR207C 1581 nt5.65□□□□□ -1.5
SDO1Q07953 YSC83YHR017W 1158 nt5.65□□□□□ -1.5
SDO1Q07953 CWC27YPL064C 906 nt5.65□□□□□ -1.5
SDO1Q07953 IVY1YDR229W 1362 nt5.65□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms