Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 PET117YER058W 324 nt7.61□□□□□ -1.19
UBP3Q01477 SEC24YIL109C 2781 nt7.6□□□□□ -1.19
UBP3Q01477 YOS9YDR057W 1629 nt7.6□□□□□ -1.19
UBP3Q01477 SUF3tG(CCC)D 72 nt7.6□□□□□ -1.19
UBP3Q01477 TRR2YHR106W 1029 nt7.6□□□□□ -1.19 RIP-Chip
UBP3Q01477 DFR1YOR236W 636 nt7.6□□□□□ -1.19 RIP-Chip
UBP3Q01477 YPR130CYPR130C 408 nt7.6□□□□□ -1.19
UBP3Q01477 DPM1YPR183W 804 nt7.6□□□□□ -1.19
UBP3Q01477 BSC5YNR069C 1470 nt7.6□□□□□ -1.19
UBP3Q01477 EDC3YEL015W 1656 nt7.6□□□□□ -1.19 RIP-Chip
UBP3Q01477 GUS1YGL245W 2127 nt7.6□□□□□ -1.19 RIP-Chip
UBP3Q01477 DEF1YKL054C 2217 nt7.59□□□□□ -1.19
UBP3Q01477 GAT1YFL021W 1533 nt7.59□□□□□ -1.19
UBP3Q01477 YIL092WYIL092W 1902 nt7.59□□□□□ -1.19 RIP-Chip
UBP3Q01477 CST26YBR042C 1194 nt7.59□□□□□ -1.19
UBP3Q01477 GUF1YLR289W 1938 nt7.58□□□□□ -1.2
UBP3Q01477 NAF1YNL124W 1479 nt7.58□□□□□ -1.2
UBP3Q01477 RRP1YDR087C 837 nt7.58□□□□□ -1.2
UBP3Q01477 DSE3YOR264W 1293 nt7.58□□□□□ -1.2
UBP3Q01477 snR30snR30 606 nt7.58□□□□□ -1.2
UBP3Q01477 RSC2YLR357W 2670 nt7.58□□□□□ -1.2
UBP3Q01477 CLB4YLR210W 1383 nt7.58□□□□□ -1.2
UBP3Q01477 YIR020W-AYIR020W-A 243 nt7.57□□□□□ -1.2
UBP3Q01477 MRPL24YMR193W 777 nt7.57□□□□□ -1.2
UBP3Q01477 YMR027WYMR027W 1413 nt7.57□□□□□ -1.2 RIP-Chip
UBP3Q01477 LAT1YNL071W 1449 nt7.57□□□□□ -1.2 RIP-Chip
UBP3Q01477 FCY2YER056C 1602 nt7.56□□□□□ -1.2
UBP3Q01477 YNL247WYNL247W 2304 nt7.56□□□□□ -1.2
UBP3Q01477 YDL023CYDL023C 321 nt7.56□□□□□ -1.2
UBP3Q01477 YPQ2YDR352W 954 nt7.56□□□□□ -1.2
UBP3Q01477 JJJ3YJR097W 519 nt7.56□□□□□ -1.2
UBP3Q01477 YLR036CYLR036C 612 nt7.56□□□□□ -1.2
UBP3Q01477 PRS4YBL068W 981 nt7.56□□□□□ -1.2
UBP3Q01477 MRI1YPR118W 1236 nt7.56□□□□□ -1.2
UBP3Q01477 ENB1YOL158C 1821 nt7.56□□□□□ -1.2 RIP-Chip
UBP3Q01477 ATG18YFR021W 1503 nt7.56□□□□□ -1.2
UBP3Q01477 PRB1YEL060C 1908 nt7.56□□□□□ -1.2
UBP3Q01477 CAN1YEL063C 1773 nt7.56□□□□□ -1.2
UBP3Q01477 VPS72YDR485C 2388 nt7.55□□□□□ -1.2 RIP-Chip
UBP3Q01477 YOX1YML027W 1158 nt7.55□□□□□ -1.2
UBP3Q01477 MIX17YMR002W 471 nt7.55□□□□□ -1.2
UBP3Q01477 ZIM17YNL310C 525 nt7.55□□□□□ -1.2
UBP3Q01477 CTR1YPR124W 1221 nt7.55□□□□□ -1.2
UBP3Q01477 DML1YMR211W 1428 nt7.54□□□□□ -1.2 RIP-Chip
UBP3Q01477 MPA43YNL249C 1629 nt7.54□□□□□ -1.2
UBP3Q01477 RSA3YLR221C 663 nt7.54□□□□□ -1.2
UBP3Q01477 ELC1YPL046C 300 nt7.54□□□□□ -1.2
UBP3Q01477 AIM17YHL021C 1398 nt7.54□□□□□ -1.2
UBP3Q01477 SNF11YDR073W 510 nt7.53□□□□□ -1.2
UBP3Q01477 YLR311CYLR311C 348 nt7.53□□□□□ -1.2
UBP3Q01477 PLB2YMR006C 2121 nt7.53□□□□□ -1.2
UBP3Q01477 PHO85YPL031C 918 nt7.53□□□□□ -1.2
UBP3Q01477 HAL1YPR005C 885 nt7.53□□□□□ -1.2
UBP3Q01477 YCL049CYCL049C 939 nt7.53□□□□□ -1.2
UBP3Q01477 TOS2YGR221C 1869 nt7.53□□□□□ -1.2 RIP-Chip
UBP3Q01477 CTA1YDR256C 1548 nt7.52□□□□□ -1.2
UBP3Q01477 DIT1YDR403W 1611 nt7.52□□□□□ -1.2 RIP-Chip
UBP3Q01477 SED5YLR026C 1023 nt7.52□□□□□ -1.21
UBP3Q01477 GET4YOR164C 939 nt7.52□□□□□ -1.21
UBP3Q01477 LOT6YLR011W 576 nt7.51□□□□□ -1.21
UBP3Q01477 SUN4YNL066W 1263 nt7.51□□□□□ -1.21
UBP3Q01477 RPL43AYPR043W 279 nt7.51□□□□□ -1.21 RIP-Chip
UBP3Q01477 ICL2YPR006C 1728 nt7.51□□□□□ -1.21
UBP3Q01477 MKK1YOR231W 1527 nt7.51□□□□□ -1.21
UBP3Q01477 MSN2YMR037C 2115 nt7.51□□□□□ -1.21
UBP3Q01477 MPE1YKL059C 1326 nt7.51□□□□□ -1.21
UBP3Q01477 TUB1YML085C 1344 nt7.51□□□□□ -1.21
UBP3Q01477 TRR1YDR353W 960 nt7.5□□□□□ -1.21
UBP3Q01477 COS10YNR075W 1125 nt7.5□□□□□ -1.21
UBP3Q01477 TFB4YPR056W 1017 nt7.5□□□□□ -1.21
UBP3Q01477 TOD6YBL054W 1578 nt7.5□□□□□ -1.21
UBP3Q01477 GLE1YDL207W 1617 nt7.49□□□□□ -1.21
UBP3Q01477 RCK1YGL158W 1539 nt7.49□□□□□ -1.21
UBP3Q01477 FET4YMR319C 1659 nt7.49□□□□□ -1.21
UBP3Q01477 YAL016C-BYAL016C-B 186 nt7.49□□□□□ -1.21
UBP3Q01477 YLR162WYLR162W 357 nt7.49□□□□□ -1.21
UBP3Q01477 YMR114CYMR114C 1107 nt7.49□□□□□ -1.21 RIP-Chip
UBP3Q01477 ODC2YOR222W 924 nt7.49□□□□□ -1.21
UBP3Q01477 HSM3YBR272C 1443 nt7.49□□□□□ -1.21
UBP3Q01477 BRN1YBL097W 2265 nt7.49□□□□□ -1.21
UBP3Q01477 NUP84YDL116W 2181 nt7.48□□□□□ -1.21
UBP3Q01477 CIA1YDR267C 993 nt7.48□□□□□ -1.21 RIP-Chip
UBP3Q01477 YIP4YGL198W 708 nt7.48□□□□□ -1.21 RIP-Chip
UBP3Q01477 YGR291CYGR291C 222 nt7.48□□□□□ -1.21
UBP3Q01477 LYS12YIL094C 1116 nt7.48□□□□□ -1.21 RIP-Chip
UBP3Q01477 YJU2YKL095W 837 nt7.48□□□□□ -1.21
UBP3Q01477 PEX12YMR026C 1200 nt7.48□□□□□ -1.21 RIP-Chip
UBP3Q01477 YNR001W-AYNR001W-A 219 nt7.48□□□□□ -1.21
UBP3Q01477 VTS1YOR359W 1572 nt7.48□□□□□ -1.21
UBP3Q01477 YBR298C-AYBR298C-A 222 nt7.48□□□□□ -1.21
UBP3Q01477 NEM1YHR004C 1341 nt7.48□□□□□ -1.21
UBP3Q01477 YBR138CYBR138C 1575 nt7.47□□□□□ -1.21
UBP3Q01477 SVF1YDR346C 1446 nt7.47□□□□□ -1.21
UBP3Q01477 PMT3YOR321W 2262 nt7.47□□□□□ -1.21
UBP3Q01477 YER137CYER137C 447 nt7.47□□□□□ -1.21
UBP3Q01477 AIM46YHR199C 933 nt7.47□□□□□ -1.21
UBP3Q01477 YNL228WYNL228W 777 nt7.47□□□□□ -1.21
UBP3Q01477 RFA2YNL312W 822 nt7.47□□□□□ -1.21
UBP3Q01477 MCP1YOR228C 909 nt7.47□□□□□ -1.21
UBP3Q01477 RPN5YDL147W 1338 nt7.47□□□□□ -1.21 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms