Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBA52P62987 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBA52P62987 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBA52P62987 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.88■□□□□ 0.93
UBA52P62987 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBA52P62987 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.88■□□□□ 0.93
UBA52P62987 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
UBA52P62987 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA52P62987 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBA52P62987 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBA52P62987 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA52P62987 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.87■□□□□ 0.93
UBA52P62987 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA52P62987 GPX1-201ENST00000419349 1106 ntBASIC20.87■□□□□ 0.93
UBA52P62987 ABHD17AP5-201ENST00000580133 923 ntBASIC20.87■□□□□ 0.93
UBA52P62987 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA52P62987 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBA52P62987 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.87■□□□□ 0.93
UBA52P62987 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA52P62987 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBA52P62987 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.86■□□□□ 0.93
UBA52P62987 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
UBA52P62987 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.86■□□□□ 0.93
UBA52P62987 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBA52P62987 LINC00273-201ENST00000539813 1452 ntBASIC20.86■□□□□ 0.93
UBA52P62987 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBA52P62987 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBA52P62987 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA52P62987 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.85■□□□□ 0.93
UBA52P62987 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBA52P62987 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBA52P62987 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.85■□□□□ 0.93
UBA52P62987 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBA52P62987 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBA52P62987 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA52P62987 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.84■□□□□ 0.93
UBA52P62987 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA52P62987 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.84■□□□□ 0.93
UBA52P62987 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UBA52P62987 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA52P62987 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.84■□□□□ 0.93
UBA52P62987 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
UBA52P62987 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBA52P62987 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
UBA52P62987 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.83■□□□□ 0.92
UBA52P62987 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA52P62987 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA52P62987 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA52P62987 RNF126P1-201ENST00000567452 1320 ntBASIC20.81■□□□□ 0.92
UBA52P62987 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.81■□□□□ 0.92
UBA52P62987 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBA52P62987 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
UBA52P62987 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
UBA52P62987 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.8■□□□□ 0.92
UBA52P62987 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
UBA52P62987 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.79■□□□□ 0.92
UBA52P62987 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
UBA52P62987 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBA52P62987 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.79■□□□□ 0.92
UBA52P62987 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBA52P62987 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.79■□□□□ 0.92
UBA52P62987 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBA52P62987 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBA52P62987 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.78■□□□□ 0.92
UBA52P62987 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBA52P62987 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
UBA52P62987 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBA52P62987 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBA52P62987 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
UBA52P62987 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBA52P62987 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBA52P62987 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBA52P62987 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBA52P62987 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBA52P62987 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBA52P62987 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA52P62987 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
UBA52P62987 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBA52P62987 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA52P62987 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBA52P62987 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA52P62987 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
UBA52P62987 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA52P62987 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
UBA52P62987 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.75■□□□□ 0.91
UBA52P62987 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBA52P62987 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.74■□□□□ 0.91
UBA52P62987 AC010864.1-201ENST00000609407 1511 ntBASIC20.74■□□□□ 0.91
UBA52P62987 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA52P62987 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
UBA52P62987 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms