Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN6P56747 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN6P56747 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN6P56747 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.81■■□□□ 1.4
CLDN6P56747 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN6P56747 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CLDN6P56747 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CLDN6P56747 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN6P56747 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN6P56747 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.79■■□□□ 1.4
CLDN6P56747 AC103724.3-201ENST00000564481 992 ntBASIC23.79■■□□□ 1.4
CLDN6P56747 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN6P56747 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN6P56747 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN6P56747 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN6P56747 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN6P56747 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN6P56747 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.77■■□□□ 1.4
CLDN6P56747 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.77■■□□□ 1.4
CLDN6P56747 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN6P56747 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN6P56747 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN6P56747 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN6P56747 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN6P56747 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN6P56747 MIR4508-201ENST00000584178 70 ntBASIC23.76■■□□□ 1.39
CLDN6P56747 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.76■■□□□ 1.39
CLDN6P56747 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN6P56747 AL356441.2-201ENST00000443009 864 ntBASIC23.75■■□□□ 1.39
CLDN6P56747 AL031848.2-201ENST00000607670 837 ntBASIC23.75■■□□□ 1.39
CLDN6P56747 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN6P56747 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN6P56747 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CLDN6P56747 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.74■■□□□ 1.39
CLDN6P56747 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN6P56747 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.74■■□□□ 1.39
CLDN6P56747 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN6P56747 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.74■■□□□ 1.39
CLDN6P56747 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN6P56747 AL139393.2-201ENST00000608721 2025 ntBASIC23.73■■□□□ 1.39
CLDN6P56747 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
CLDN6P56747 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.73■■□□□ 1.39
CLDN6P56747 AL359504.2-201ENST00000605506 1601 ntBASIC23.73■■□□□ 1.39
CLDN6P56747 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
CLDN6P56747 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.72■■□□□ 1.39
CLDN6P56747 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN6P56747 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.72■■□□□ 1.39
CLDN6P56747 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN6P56747 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CLDN6P56747 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN6P56747 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CLDN6P56747 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CLDN6P56747 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN6P56747 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CLDN6P56747 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.71■■□□□ 1.39
CLDN6P56747 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN6P56747 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.71■■□□□ 1.39
CLDN6P56747 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN6P56747 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CLDN6P56747 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CLDN6P56747 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLDN6P56747 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.7■■□□□ 1.38
CLDN6P56747 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLDN6P56747 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.7■■□□□ 1.38
CLDN6P56747 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.7■■□□□ 1.38
CLDN6P56747 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
CLDN6P56747 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CLDN6P56747 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CLDN6P56747 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CLDN6P56747 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN6P56747 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN6P56747 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN6P56747 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CLDN6P56747 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.67■■□□□ 1.38
CLDN6P56747 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN6P56747 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN6P56747 AC239859.2-201ENST00000444165 318 ntBASIC23.67■■□□□ 1.38
CLDN6P56747 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN6P56747 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN6P56747 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN6P56747 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.66■■□□□ 1.38
CLDN6P56747 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN6P56747 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.66■■□□□ 1.38
CLDN6P56747 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.66■■□□□ 1.38
CLDN6P56747 AP002414.2-202ENST00000590929 1450 ntBASIC23.66■■□□□ 1.38
CLDN6P56747 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CLDN6P56747 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.65■■□□□ 1.38
CLDN6P56747 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN6P56747 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.64■■□□□ 1.37
CLDN6P56747 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
CLDN6P56747 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CLDN6P56747 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN6P56747 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN6P56747 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLDN6P56747 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CLDN6P56747 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.62■■□□□ 1.37
CLDN6P56747 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.62■■□□□ 1.37
CLDN6P56747 ABCB10P1-201ENST00000614297 2181 ntBASIC23.62■■□□□ 1.37
CLDN6P56747 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLDN6P56747 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms