Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
WNT3P56703 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
WNT3P56703 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
WNT3P56703 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
WNT3P56703 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
WNT3P56703 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
WNT3P56703 AC020928.2-201ENST00000588717 2197 ntBASIC23.27■■□□□ 1.32
WNT3P56703 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.27■■□□□ 1.32
WNT3P56703 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
WNT3P56703 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
WNT3P56703 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
WNT3P56703 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
WNT3P56703 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
WNT3P56703 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
WNT3P56703 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.26■■□□□ 1.31
WNT3P56703 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
WNT3P56703 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
WNT3P56703 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
WNT3P56703 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.25■■□□□ 1.31
WNT3P56703 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
WNT3P56703 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
WNT3P56703 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.25■■□□□ 1.31
WNT3P56703 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.25■■□□□ 1.31
WNT3P56703 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.25■■□□□ 1.31
WNT3P56703 AC135731.1-201ENST00000569415 2548 ntBASIC23.25■■□□□ 1.31
WNT3P56703 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.25■■□□□ 1.31
WNT3P56703 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
WNT3P56703 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WNT3P56703 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WNT3P56703 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
WNT3P56703 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.24■■□□□ 1.31
WNT3P56703 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WNT3P56703 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.24■■□□□ 1.31
WNT3P56703 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
WNT3P56703 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.23■■□□□ 1.31
WNT3P56703 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.23■■□□□ 1.31
WNT3P56703 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
WNT3P56703 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
WNT3P56703 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
WNT3P56703 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
WNT3P56703 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WNT3P56703 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
WNT3P56703 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WNT3P56703 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
WNT3P56703 AC008813.1-201ENST00000536597 885 ntBASIC23.21■■□□□ 1.31
WNT3P56703 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
WNT3P56703 MIR219A2-201ENST00000608502 1504 ntBASIC23.21■■□□□ 1.31
WNT3P56703 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
WNT3P56703 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.21■■□□□ 1.31
WNT3P56703 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
WNT3P56703 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
WNT3P56703 AC148477.6-201ENST00000623746 465 ntBASIC23.2■■□□□ 1.3
WNT3P56703 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
WNT3P56703 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
WNT3P56703 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
WNT3P56703 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.19■■□□□ 1.3
WNT3P56703 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
WNT3P56703 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
WNT3P56703 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
WNT3P56703 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.18■■□□□ 1.3
WNT3P56703 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.18■■□□□ 1.3
WNT3P56703 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
WNT3P56703 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
WNT3P56703 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
WNT3P56703 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
WNT3P56703 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
WNT3P56703 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
WNT3P56703 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
WNT3P56703 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
WNT3P56703 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
WNT3P56703 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
WNT3P56703 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
WNT3P56703 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
WNT3P56703 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
WNT3P56703 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
WNT3P56703 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
WNT3P56703 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.16■■□□□ 1.3
WNT3P56703 ERN1-208ENST00000606895 2068 ntBASIC23.15■■□□□ 1.3
WNT3P56703 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
WNT3P56703 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
WNT3P56703 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
WNT3P56703 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
WNT3P56703 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
WNT3P56703 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
WNT3P56703 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.14■■□□□ 1.3
WNT3P56703 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.14■■□□□ 1.29
WNT3P56703 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
WNT3P56703 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.14■■□□□ 1.29
WNT3P56703 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3P56703 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3P56703 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
WNT3P56703 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3P56703 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
WNT3P56703 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms