Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.67■□□□□ 0.9
TFF1P04155 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TFF1P04155 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TFF1P04155 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.66■□□□□ 0.9
TFF1P04155 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.66■□□□□ 0.9
TFF1P04155 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TFF1P04155 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TFF1P04155 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.65■□□□□ 0.9
TFF1P04155 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TFF1P04155 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.65■□□□□ 0.9
TFF1P04155 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.65■□□□□ 0.9
TFF1P04155 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.65■□□□□ 0.9
TFF1P04155 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.64■□□□□ 0.9
TFF1P04155 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TFF1P04155 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TFF1P04155 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TFF1P04155 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.63■□□□□ 0.89
TFF1P04155 AC060814.1-201ENST00000554326 538 ntBASIC20.63■□□□□ 0.89
TFF1P04155 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.63■□□□□ 0.89
TFF1P04155 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TFF1P04155 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TFF1P04155 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TFF1P04155 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TFF1P04155 AC142472.1-201ENST00000612013 1741 ntBASIC20.62■□□□□ 0.89
TFF1P04155 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.62■□□□□ 0.89
TFF1P04155 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TFF1P04155 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.62■□□□□ 0.89
TFF1P04155 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TFF1P04155 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TFF1P04155 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TFF1P04155 AL359504.2-201ENST00000605506 1601 ntBASIC20.61■□□□□ 0.89
TFF1P04155 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TFF1P04155 AC022413.1-201ENST00000624602 984 ntBASIC20.61■□□□□ 0.89
TFF1P04155 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TFF1P04155 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TFF1P04155 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.6■□□□□ 0.89
TFF1P04155 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TFF1P04155 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TFF1P04155 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TFF1P04155 AL157400.5-201ENST00000507624 621 ntBASIC20.59■□□□□ 0.89
TFF1P04155 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TFF1P04155 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TFF1P04155 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.59■□□□□ 0.89
TFF1P04155 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TFF1P04155 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TFF1P04155 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TFF1P04155 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TFF1P04155 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TFF1P04155 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TFF1P04155 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TFF1P04155 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TFF1P04155 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.57■□□□□ 0.88
TFF1P04155 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TFF1P04155 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TFF1P04155 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.57■□□□□ 0.88
TFF1P04155 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.57■□□□□ 0.88
TFF1P04155 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.56■□□□□ 0.88
TFF1P04155 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 GPX1-201ENST00000419349 1106 ntBASIC20.56■□□□□ 0.88
TFF1P04155 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TFF1P04155 AC126177.7-201ENST00000547904 679 ntBASIC20.56■□□□□ 0.88
TFF1P04155 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.55■□□□□ 0.88
TFF1P04155 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TFF1P04155 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TFF1P04155 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TFF1P04155 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TFF1P04155 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.54■□□□□ 0.88
TFF1P04155 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TFF1P04155 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TFF1P04155 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TFF1P04155 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.53■□□□□ 0.88
TFF1P04155 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.53■□□□□ 0.88
TFF1P04155 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TFF1P04155 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.53■□□□□ 0.88
TFF1P04155 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.53■□□□□ 0.88
TFF1P04155 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TFF1P04155 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.53■□□□□ 0.88
TFF1P04155 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TFF1P04155 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TFF1P04155 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TFF1P04155 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TFF1P04155 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.52■□□□□ 0.88
TFF1P04155 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TFF1P04155 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TFF1P04155 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TFF1P04155 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TFF1P04155 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TFF1P04155 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.51■□□□□ 0.87
TFF1P04155 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TFF1P04155 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.51■□□□□ 0.87
TFF1P04155 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TFF1P04155 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.5■□□□□ 0.87
TFF1P04155 AC092296.2-201ENST00000589470 999 ntBASIC20.5■□□□□ 0.87
TFF1P04155 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms