Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.3■■□□□ 1
KDM4BO94953 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.3■■□□□ 1
KDM4BO94953 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4BO94953 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4BO94953 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.29■■□□□ 1
KDM4BO94953 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.29■■□□□ 1
KDM4BO94953 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.29■■□□□ 1
KDM4BO94953 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KDM4BO94953 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM4BO94953 DUX4L29-201ENST00000425409 679 ntBASIC21.28■■□□□ 1
KDM4BO94953 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.28■■□□□ 1
KDM4BO94953 AC110285.7-201ENST00000624417 1536 ntBASIC21.28■■□□□ 1
KDM4BO94953 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KDM4BO94953 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM4BO94953 AP004609.3-201ENST00000610705 1884 ntBASIC21.27■■□□□ 1
KDM4BO94953 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
KDM4BO94953 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.27■■□□□ 1
KDM4BO94953 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.27■■□□□ 1
KDM4BO94953 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDM4BO94953 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KDM4BO94953 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM4BO94953 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4BO94953 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4BO94953 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4BO94953 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.26■□□□□ 0.99
KDM4BO94953 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4BO94953 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4BO94953 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4BO94953 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM4BO94953 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM4BO94953 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.25■□□□□ 0.99
KDM4BO94953 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
KDM4BO94953 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM4BO94953 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM4BO94953 AC093323.1-202ENST00000635031 2045 ntBASIC21.24■□□□□ 0.99
KDM4BO94953 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4BO94953 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4BO94953 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM4BO94953 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4BO94953 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM4BO94953 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM4BO94953 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KDM4BO94953 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
KDM4BO94953 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM4BO94953 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4BO94953 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM4BO94953 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
KDM4BO94953 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDM4BO94953 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDM4BO94953 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDM4BO94953 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDM4BO94953 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.2■□□□□ 0.98
KDM4BO94953 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
KDM4BO94953 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
KDM4BO94953 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KDM4BO94953 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KDM4BO94953 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM4BO94953 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.19■□□□□ 0.98
KDM4BO94953 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDM4BO94953 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM4BO94953 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM4BO94953 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.18■□□□□ 0.98
KDM4BO94953 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KDM4BO94953 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KDM4BO94953 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KDM4BO94953 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KDM4BO94953 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM4BO94953 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.18■□□□□ 0.98
KDM4BO94953 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KDM4BO94953 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KDM4BO94953 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM4BO94953 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM4BO94953 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.17■□□□□ 0.98
KDM4BO94953 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM4BO94953 RPS2P35-201ENST00000443417 897 ntBASIC21.17■□□□□ 0.98
KDM4BO94953 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM4BO94953 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM4BO94953 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM4BO94953 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KDM4BO94953 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM4BO94953 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM4BO94953 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.16■□□□□ 0.98
KDM4BO94953 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM4BO94953 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDM4BO94953 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.15■□□□□ 0.98
KDM4BO94953 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDM4BO94953 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.14■□□□□ 0.98
KDM4BO94953 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDM4BO94953 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDM4BO94953 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KDM4BO94953 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDM4BO94953 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms