Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PFDN1O60925 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PFDN1O60925 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PFDN1O60925 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PFDN1O60925 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.07■■□□□ 1.12
PFDN1O60925 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PFDN1O60925 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PFDN1O60925 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.07■■□□□ 1.12
PFDN1O60925 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PFDN1O60925 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.06■■□□□ 1.12
PFDN1O60925 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PFDN1O60925 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PFDN1O60925 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PFDN1O60925 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PFDN1O60925 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PFDN1O60925 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PFDN1O60925 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PFDN1O60925 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PFDN1O60925 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PFDN1O60925 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.03■■□□□ 1.12
PFDN1O60925 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PFDN1O60925 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PFDN1O60925 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PFDN1O60925 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PFDN1O60925 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PFDN1O60925 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
PFDN1O60925 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PFDN1O60925 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PFDN1O60925 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PFDN1O60925 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PFDN1O60925 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
PFDN1O60925 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PFDN1O60925 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PFDN1O60925 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.01■■□□□ 1.11
PFDN1O60925 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PFDN1O60925 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PFDN1O60925 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PFDN1O60925 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PFDN1O60925 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PFDN1O60925 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PFDN1O60925 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22■■□□□ 1.11
PFDN1O60925 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PFDN1O60925 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22■■□□□ 1.11
PFDN1O60925 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PFDN1O60925 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PFDN1O60925 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PFDN1O60925 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PFDN1O60925 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PFDN1O60925 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PFDN1O60925 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PFDN1O60925 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PFDN1O60925 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.98■■□□□ 1.11
PFDN1O60925 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PFDN1O60925 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PFDN1O60925 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PFDN1O60925 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PFDN1O60925 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.97■■□□□ 1.11
PFDN1O60925 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.97■■□□□ 1.11
PFDN1O60925 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PFDN1O60925 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PFDN1O60925 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.97■■□□□ 1.11
PFDN1O60925 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PFDN1O60925 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PFDN1O60925 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.96■■□□□ 1.11
PFDN1O60925 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PFDN1O60925 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PFDN1O60925 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PFDN1O60925 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.96■■□□□ 1.11
PFDN1O60925 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PFDN1O60925 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PFDN1O60925 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PFDN1O60925 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PFDN1O60925 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PFDN1O60925 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PFDN1O60925 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PFDN1O60925 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PFDN1O60925 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PFDN1O60925 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PFDN1O60925 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PFDN1O60925 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.93■■□□□ 1.1
PFDN1O60925 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PFDN1O60925 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PFDN1O60925 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PFDN1O60925 SLC25A24-204ENST00000569674 2357 ntBASIC21.93■■□□□ 1.1
PFDN1O60925 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
PFDN1O60925 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
PFDN1O60925 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PFDN1O60925 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PFDN1O60925 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms