Protein–RNA interactions for Protein: A6NFE3

EFCAB10, EF-hand calcium-binding domain-containing protein 10, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB10A6NFE3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB10A6NFE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB10A6NFE3 LINC00273-201ENST00000539813 1452 ntBASIC22.14■■□□□ 1.13
EFCAB10A6NFE3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCAB10A6NFE3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB10A6NFE3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCAB10A6NFE3 AC010501.1-201ENST00000606270 1962 ntBASIC22.11■■□□□ 1.13
EFCAB10A6NFE3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
EFCAB10A6NFE3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.1■■□□□ 1.13
EFCAB10A6NFE3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
EFCAB10A6NFE3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB10A6NFE3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.1■■□□□ 1.13
EFCAB10A6NFE3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
EFCAB10A6NFE3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB10A6NFE3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB10A6NFE3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB10A6NFE3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB10A6NFE3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB10A6NFE3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB10A6NFE3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB10A6NFE3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.07■■□□□ 1.12
EFCAB10A6NFE3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB10A6NFE3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB10A6NFE3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB10A6NFE3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 MIR762-201ENST00000390236 83 ntBASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB10A6NFE3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.05■■□□□ 1.12
EFCAB10A6NFE3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
EFCAB10A6NFE3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
EFCAB10A6NFE3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
EFCAB10A6NFE3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
EFCAB10A6NFE3 WHAMMP3-201ENST00000611636 1609 ntBASIC22.05■■□□□ 1.12
EFCAB10A6NFE3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
EFCAB10A6NFE3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
EFCAB10A6NFE3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
EFCAB10A6NFE3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.04■■□□□ 1.12
EFCAB10A6NFE3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 AC108673.1-201ENST00000510422 1159 ntBASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
EFCAB10A6NFE3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 AL139125.2-201ENST00000623134 1869 ntBASIC22.02■■□□□ 1.12
EFCAB10A6NFE3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
EFCAB10A6NFE3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
EFCAB10A6NFE3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
EFCAB10A6NFE3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22■■□□□ 1.11
EFCAB10A6NFE3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
EFCAB10A6NFE3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22■■□□□ 1.11
EFCAB10A6NFE3 CHML-205ENST00000638160 705 ntTSL 3 BASIC22■■□□□ 1.11
EFCAB10A6NFE3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
EFCAB10A6NFE3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 AC022211.4-201ENST00000625094 2161 ntBASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
EFCAB10A6NFE3 AC138932.3-201ENST00000567634 1902 ntBASIC21.98■■□□□ 1.11
EFCAB10A6NFE3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
EFCAB10A6NFE3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms