Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 AC126177.7-201ENST00000547904 679 ntBASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.65■□□□□ 0.74
TCRBV4S1A1TA0A5B7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV4S1A1TA0A5B7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV4S1A1TA0A5B7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TCRBV4S1A1TA0A5B7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.64■□□□□ 0.73
TCRBV4S1A1TA0A5B7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 AC060814.1-201ENST00000554326 538 ntBASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TCRBV4S1A1TA0A5B7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV4S1A1TA0A5B7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV4S1A1TA0A5B7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV4S1A1TA0A5B7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV4S1A1TA0A5B7 AL449106.1-201ENST00000608517 1980 ntBASIC19.62■□□□□ 0.73
TCRBV4S1A1TA0A5B7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV4S1A1TA0A5B7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV4S1A1TA0A5B7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV4S1A1TA0A5B7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV4S1A1TA0A5B7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV4S1A1TA0A5B7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBV4S1A1TA0A5B7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV4S1A1TA0A5B7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV4S1A1TA0A5B7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV4S1A1TA0A5B7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV4S1A1TA0A5B7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TCRBV4S1A1TA0A5B7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV4S1A1TA0A5B7 AC091060.1-201ENST00000623524 1766 ntBASIC19.58■□□□□ 0.73
TCRBV4S1A1TA0A5B7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV4S1A1TA0A5B7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TCRBV4S1A1TA0A5B7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV4S1A1TA0A5B7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TCRBV4S1A1TA0A5B7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV4S1A1TA0A5B7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBV4S1A1TA0A5B7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV4S1A1TA0A5B7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBV4S1A1TA0A5B7 NTF6A-201ENST00000591175 560 ntBASIC19.55■□□□□ 0.72
TCRBV4S1A1TA0A5B7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TCRBV4S1A1TA0A5B7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCRBV4S1A1TA0A5B7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.54■□□□□ 0.72
TCRBV4S1A1TA0A5B7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBV4S1A1TA0A5B7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV4S1A1TA0A5B7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBV4S1A1TA0A5B7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.52■□□□□ 0.72
TCRBV4S1A1TA0A5B7 ECEL1P2-201ENST00000461596 1295 ntBASIC19.52■□□□□ 0.72
TCRBV4S1A1TA0A5B7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 AC092296.2-201ENST00000589470 999 ntBASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBV4S1A1TA0A5B7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 AC145676.1-201ENST00000514988 2004 ntBASIC19.5■□□□□ 0.71
TCRBV4S1A1TA0A5B7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms