Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV6-1A0A0K0K1D8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRBV6-1A0A0K0K1D8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV6-1A0A0K0K1D8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-1A0A0K0K1D8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV6-1A0A0K0K1D8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV6-1A0A0K0K1D8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-1A0A0K0K1D8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV6-1A0A0K0K1D8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-1A0A0K0K1D8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 AL139125.2-201ENST00000623134 1869 ntBASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-1A0A0K0K1D8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-1A0A0K0K1D8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-1A0A0K0K1D8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV6-1A0A0K0K1D8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.36■□□□□ 0.53
TRBV6-1A0A0K0K1D8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-1A0A0K0K1D8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-1A0A0K0K1D8 AC110285.7-201ENST00000624417 1536 ntBASIC18.35■□□□□ 0.53
TRBV6-1A0A0K0K1D8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV6-1A0A0K0K1D8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-1A0A0K0K1D8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRBV6-1A0A0K0K1D8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-1A0A0K0K1D8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TRBV6-1A0A0K0K1D8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV6-1A0A0K0K1D8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.33■□□□□ 0.53
TRBV6-1A0A0K0K1D8 AC022211.4-201ENST00000625094 2161 ntBASIC18.33■□□□□ 0.52
TRBV6-1A0A0K0K1D8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-1A0A0K0K1D8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRBV6-1A0A0K0K1D8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV6-1A0A0K0K1D8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-1A0A0K0K1D8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 AC138932.3-201ENST00000567634 1902 ntBASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRBV6-1A0A0K0K1D8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-1A0A0K0K1D8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-1A0A0K0K1D8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-1A0A0K0K1D8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV6-1A0A0K0K1D8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-1A0A0K0K1D8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV6-1A0A0K0K1D8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV6-1A0A0K0K1D8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-1A0A0K0K1D8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-1A0A0K0K1D8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-1A0A0K0K1D8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV6-1A0A0K0K1D8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TRBV6-1A0A0K0K1D8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.27■□□□□ 0.51
TRBV6-1A0A0K0K1D8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV6-1A0A0K0K1D8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV6-1A0A0K0K1D8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-1A0A0K0K1D8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-1A0A0K0K1D8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV6-1A0A0K0K1D8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-1A0A0K0K1D8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV6-1A0A0K0K1D8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV6-1A0A0K0K1D8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV6-1A0A0K0K1D8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms