Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV4A0A0C4DH28 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV4A0A0C4DH28 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRGV4A0A0C4DH28 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.51■□□□□ 0.39
TRGV4A0A0C4DH28 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRGV4A0A0C4DH28 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 AC126177.7-201ENST00000547904 679 ntBASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRGV4A0A0C4DH28 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV4A0A0C4DH28 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV4A0A0C4DH28 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRGV4A0A0C4DH28 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 AC142472.1-201ENST00000612013 1741 ntBASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRGV4A0A0C4DH28 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.46■□□□□ 0.39
TRGV4A0A0C4DH28 AL359258.2-201ENST00000564063 1566 ntBASIC17.46■□□□□ 0.39
TRGV4A0A0C4DH28 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.46■□□□□ 0.39
TRGV4A0A0C4DH28 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.46■□□□□ 0.39
TRGV4A0A0C4DH28 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.46■□□□□ 0.39
TRGV4A0A0C4DH28 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRGV4A0A0C4DH28 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV4A0A0C4DH28 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.45■□□□□ 0.38
TRGV4A0A0C4DH28 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.45■□□□□ 0.38
TRGV4A0A0C4DH28 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRGV4A0A0C4DH28 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV4A0A0C4DH28 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV4A0A0C4DH28 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRGV4A0A0C4DH28 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV4A0A0C4DH28 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRGV4A0A0C4DH28 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRGV4A0A0C4DH28 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV4A0A0C4DH28 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV4A0A0C4DH28 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.43■□□□□ 0.38
TRGV4A0A0C4DH28 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV4A0A0C4DH28 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV4A0A0C4DH28 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV4A0A0C4DH28 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV4A0A0C4DH28 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 MIR639-201ENST00000384974 98 ntBASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRGV4A0A0C4DH28 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms