Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV3D-20A0A0C4DH25 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
IGKV3D-20A0A0C4DH25 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
IGKV3D-20A0A0C4DH25 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV3D-20A0A0C4DH25 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV3D-20A0A0C4DH25 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 AC093323.1-202ENST00000635031 2045 ntBASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV3D-20A0A0C4DH25 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IGKV3D-20A0A0C4DH25 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGKV3D-20A0A0C4DH25 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
IGKV3D-20A0A0C4DH25 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IGKV3D-20A0A0C4DH25 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.08■□□□□ 0.49
IGKV3D-20A0A0C4DH25 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV3D-20A0A0C4DH25 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV3D-20A0A0C4DH25 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.08■□□□□ 0.48
IGKV3D-20A0A0C4DH25 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV3D-20A0A0C4DH25 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV3D-20A0A0C4DH25 AP006261.1-201ENST00000584783 668 ntBASIC18.07■□□□□ 0.48
IGKV3D-20A0A0C4DH25 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV3D-20A0A0C4DH25 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
IGKV3D-20A0A0C4DH25 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 AC087741.3-201ENST00000624270 1347 ntBASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.06■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ERN1-208ENST00000606895 2068 ntBASIC18.05■□□□□ 0.48
IGKV3D-20A0A0C4DH25 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 AC010501.1-201ENST00000606270 1962 ntBASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-20A0A0C4DH25 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
IGKV3D-20A0A0C4DH25 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV3D-20A0A0C4DH25 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV3D-20A0A0C4DH25 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.02■□□□□ 0.48
IGKV3D-20A0A0C4DH25 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
IGKV3D-20A0A0C4DH25 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
IGKV3D-20A0A0C4DH25 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV3D-20A0A0C4DH25 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms