Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.52■□□□□ 0.4
TRBV25-1A0A075B6N4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV25-1A0A075B6N4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRBV25-1A0A075B6N4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV25-1A0A075B6N4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV25-1A0A075B6N4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRBV25-1A0A075B6N4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV25-1A0A075B6N4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV25-1A0A075B6N4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRBV25-1A0A075B6N4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV25-1A0A075B6N4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV25-1A0A075B6N4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV25-1A0A075B6N4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV25-1A0A075B6N4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV25-1A0A075B6N4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV25-1A0A075B6N4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV25-1A0A075B6N4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV25-1A0A075B6N4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV25-1A0A075B6N4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV25-1A0A075B6N4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 AC044849.2-201ENST00000606596 710 ntBASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV25-1A0A075B6N4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.46■□□□□ 0.38
TRBV25-1A0A075B6N4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 AC012676.1-201ENST00000574705 1949 ntBASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV25-1A0A075B6N4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 AC087741.3-201ENST00000624270 1347 ntBASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV25-1A0A075B6N4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRBV25-1A0A075B6N4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRBV25-1A0A075B6N4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV25-1A0A075B6N4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV25-1A0A075B6N4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV25-1A0A075B6N4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBV25-1A0A075B6N4 DUSP8P4-201ENST00000399538 1761 ntBASIC17.4■□□□□ 0.38
TRBV25-1A0A075B6N4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV25-1A0A075B6N4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV25-1A0A075B6N4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV25-1A0A075B6N4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRBV25-1A0A075B6N4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV25-1A0A075B6N4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms