Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 RN7SL510P-201ENST00000581311 263 ntBASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX9Q9Y5X1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 KRT18P55-202ENST00000578578 1546 ntBASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 INTS4P1-201ENST00000438455 1935 ntBASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 AC009949.1-201ENST00000623048 1830 ntBASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 AC026471.1-201ENST00000564629 3026 ntBASIC19.06■□□□□ 0.64
SNX9Q9Y5X1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 AC116407.2-201ENST00000613639 860 ntBASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX9Q9Y5X1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 EMBP1-201ENST00000458200 901 ntBASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms