Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 KRT18P23-201ENST00000435622 1283 ntBASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 FOSL1P1-201ENST00000511041 816 ntBASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 AC106795.1-205ENST00000512851 1056 ntBASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 AC138932.1-201ENST00000534164 6830 ntBASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA7Q9Y5G6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 AC104819.1-201ENST00000504587 486 ntBASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 AL662844.1-201ENST00000546340 181 ntBASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 AC010240.3-201ENST00000607688 395 ntBASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 Z83836.1-201ENST00000624605 1642 ntBASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA7Q9Y5G6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 MYLKP1-201ENST00000509077 1580 ntBASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 PP12613-201ENST00000424958 2230 ntBASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA7Q9Y5G6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA7Q9Y5G6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA7Q9Y5G6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA7Q9Y5G6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA7Q9Y5G6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA7Q9Y5G6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms