Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YIPF1Q9Y548 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.54■□□□□ 0.56
YIPF1Q9Y548 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 MIR1199-201ENST00000621445 119 ntBASIC18.53■□□□□ 0.56
YIPF1Q9Y548 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 BX276092.7-203ENST00000637198 1536 ntBASIC18.53■□□□□ 0.56
YIPF1Q9Y548 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
YIPF1Q9Y548 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 AC003669.1-201ENST00000334569 611 ntBASIC18.52■□□□□ 0.56
YIPF1Q9Y548 AC073621.1-201ENST00000392730 636 ntBASIC18.52■□□□□ 0.56
YIPF1Q9Y548 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 AL591424.1-201ENST00000442569 1213 ntBASIC18.52■□□□□ 0.56
YIPF1Q9Y548 AC009947.1-201ENST00000444350 727 ntBASIC18.52■□□□□ 0.56
YIPF1Q9Y548 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 AC109462.3-201ENST00000573934 613 ntBASIC18.52■□□□□ 0.56
YIPF1Q9Y548 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YIPF1Q9Y548 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.52■□□□□ 0.55
YIPF1Q9Y548 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AP000997.3-201ENST00000623333 2250 ntBASIC18.51■□□□□ 0.55
YIPF1Q9Y548 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AC136632.2-201ENST00000512891 861 ntBASIC18.51■□□□□ 0.55
YIPF1Q9Y548 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.51■□□□□ 0.55
YIPF1Q9Y548 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms