Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL096865.1-201ENST00000606796 927 ntBASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 AC007064.4-201ENST00000637740 555 ntBASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTCBQ9Y3I0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
RTCBQ9Y3I0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RTCBQ9Y3I0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RTCBQ9Y3I0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 SLC25A24-204ENST00000569674 2357 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 BCRP1-201ENST00000444246 691 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 COX20P2-201ENST00000452636 358 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 AC023141.13-201ENST00000604991 943 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 AL513210.1-201ENST00000629608 234 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 AC097637.2-201ENST00000624096 1997 ntBASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTCBQ9Y3I0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 STK19B-204ENST00000512515 211 ntBASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 AC093512.1-201ENST00000617969 520 ntBASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 AC126763.1-201ENST00000552015 2118 ntBASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTCBQ9Y3I0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 STK25P1-201ENST00000585406 838 ntBASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 AL353135.1-201ENST00000606729 504 ntBASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.3■■□□□ 1.16
RTCBQ9Y3I0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 AC004461.1-201ENST00000412461 403 ntBASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 AC239800.4-201ENST00000603712 296 ntBASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 AC092902.6-201ENST00000641783 218 ntBASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTCBQ9Y3I0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms