Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 AL671883.3-201ENST00000603274 991 ntBASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 AC148477.8-201ENST00000624298 468 ntBASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 AP005117.1-201ENST00000584346 1413 ntBASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSX2IPQ9Y2D8 NFIC-211ENST00000641145 8399 ntBASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 AP001269.4-201ENST00000609611 512 ntBASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSX2IPQ9Y2D8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSX2IPQ9Y2D8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.14■□□□□ 0.66
SSX2IPQ9Y2D8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 AL138781.2-201ENST00000617896 1843 ntBASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 FAM215A-202ENST00000632077 792 ntBASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 ZNF259P1-201ENST00000407656 1365 ntBASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 LINC01126-201ENST00000623515 1646 ntBASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.14■□□□□ 0.65
SSX2IPQ9Y2D8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSX2IPQ9Y2D8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms