Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF6Q9Y252 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF6Q9Y252 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 TPM4P1-201ENST00000436100 807 ntBASIC16.8■□□□□ 0.28
RNF6Q9Y252 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF6Q9Y252 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF6Q9Y252 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF6Q9Y252 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF6Q9Y252 AD000864.1-201ENST00000624076 2295 ntBASIC16.79■□□□□ 0.28
RNF6Q9Y252 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF6Q9Y252 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 AC006116.8-202ENST00000587620 1550 ntBASIC16.78■□□□□ 0.28
RNF6Q9Y252 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF6Q9Y252 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms