Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 RNA5SP415-201ENST00000517246 115 ntBASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NOTCH3Q9UM47 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 AC022898.2-201ENST00000616822 1312 ntBASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 AC104581.1-202ENST00000635932 2618 ntBASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NOTCH3Q9UM47 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 AC093909.1-201ENST00000504731 1122 ntBASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 AC113404.2-201ENST00000507884 177 ntBASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 AC005336.2-201ENST00000593183 939 ntBASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 AL356488.2-201ENST00000602755 427 ntBASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 AC141586.3-201ENST00000562166 1838 ntBASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NOTCH3Q9UM47 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AC104109.2-201ENST00000602919 1418 ntBASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AL499627.1-201ENST00000569373 2188 ntBASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 MIR7706-201ENST00000613747 67 ntBASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NOTCH3Q9UM47 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 MTDHP3-201ENST00000594186 672 ntBASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AL138831.2-201ENST00000606564 490 ntBASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NOTCH3Q9UM47 AC079328.2-201ENST00000561241 3354 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms