Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 PMS2P4-201ENST00000412466 1052 ntBASIC18.73■□□□□ 0.59
CHD7Q9P2D1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 AL353593.2-201ENST00000602529 1483 ntBASIC18.73■□□□□ 0.59
CHD7Q9P2D1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CHD7Q9P2D1 AP002414.1-201ENST00000391405 1147 ntBASIC18.72■□□□□ 0.59
CHD7Q9P2D1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 AC074386.1-202ENST00000463561 864 ntBASIC18.72■□□□□ 0.59
CHD7Q9P2D1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD7Q9P2D1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
CHD7Q9P2D1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 FAM86GP-201ENST00000448322 971 ntBASIC18.71■□□□□ 0.59
CHD7Q9P2D1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 AC023141.13-201ENST00000604991 943 ntBASIC18.71■□□□□ 0.59
CHD7Q9P2D1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 INGX-202ENST00000489074 768 ntBASIC18.71■□□□□ 0.59
CHD7Q9P2D1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD7Q9P2D1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHD7Q9P2D1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 AC005332.7-201ENST00000614046 2005 ntBASIC18.7■□□□□ 0.58
CHD7Q9P2D1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 AL008721.1-201ENST00000609964 604 ntBASIC18.7■□□□□ 0.58
CHD7Q9P2D1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD7Q9P2D1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms