Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.08■□□□□ 0.8
COL20A1Q9P218 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL20A1Q9P218 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.08■□□□□ 0.8
COL20A1Q9P218 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL20A1Q9P218 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.08■□□□□ 0.8
COL20A1Q9P218 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.08■□□□□ 0.8
COL20A1Q9P218 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL20A1Q9P218 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.08■□□□□ 0.8
COL20A1Q9P218 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL20A1Q9P218 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.08■□□□□ 0.8
COL20A1Q9P218 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL20A1Q9P218 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.07■□□□□ 0.8
COL20A1Q9P218 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 AC138028.4-201ENST00000564984 1845 ntBASIC20.07■□□□□ 0.8
COL20A1Q9P218 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 PRYP5-201ENST00000451909 266 ntBASIC20.07■□□□□ 0.8
COL20A1Q9P218 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.07■□□□□ 0.8
COL20A1Q9P218 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.07■□□□□ 0.8
COL20A1Q9P218 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL20A1Q9P218 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 LAGE3P1-201ENST00000425356 484 ntBASIC20.06■□□□□ 0.8
COL20A1Q9P218 PMS2P1-201ENST00000431037 1228 ntBASIC20.06■□□□□ 0.8
COL20A1Q9P218 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 AC116407.2-201ENST00000613639 860 ntBASIC20.06■□□□□ 0.8
COL20A1Q9P218 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.06■□□□□ 0.8
COL20A1Q9P218 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 BX276092.7-203ENST00000637198 1536 ntBASIC20.06■□□□□ 0.8
COL20A1Q9P218 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 ABALON-201ENST00000629058 1903 ntBASIC20.06■□□□□ 0.8
COL20A1Q9P218 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL20A1Q9P218 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 AC104109.2-201ENST00000602919 1418 ntBASIC20.05■□□□□ 0.8
COL20A1Q9P218 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 KRT18P27-201ENST00000427733 1299 ntBASIC20.05■□□□□ 0.8
COL20A1Q9P218 POLD2P1-201ENST00000511220 997 ntBASIC20.05■□□□□ 0.8
COL20A1Q9P218 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 AC105339.3-201ENST00000560043 636 ntBASIC20.05■□□□□ 0.8
COL20A1Q9P218 AC145285.3-201ENST00000564603 959 ntBASIC20.05■□□□□ 0.8
COL20A1Q9P218 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL20A1Q9P218 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.05■□□□□ 0.8
COL20A1Q9P218 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms