Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 AC111152.3-201ENST00000569699 673 ntBASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 RN7SL510P-201ENST00000581311 263 ntBASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPHK1Q9NYA1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SPHK1Q9NYA1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SPHK1Q9NYA1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 EMBP1-201ENST00000458200 901 ntBASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.14■□□□□ 0.33
SPHK1Q9NYA1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 AKR1C7P-201ENST00000305623 895 ntBASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms