Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 AC132938.5-201ENST00000624980 1813 ntBASIC18.12■□□□□ 0.49
SPHK2Q9NRA0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 MIR940-201ENST00000401276 94 ntBASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 RNA5SP415-201ENST00000517246 115 ntBASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 AC019129.2-201ENST00000609837 1235 ntBASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 AL020996.1-203ENST00000536896 2307 ntBASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SPHK2Q9NRA0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 PMS2P7-201ENST00000506558 1336 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC034105.1-201ENST00000563488 319 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC109462.3-201ENST00000573934 613 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC006557.2-201ENST00000592985 1240 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 Z83851.2-201ENST00000609564 659 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 GPALPP1-207ENST00000611650 899 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AC006538.3-201ENST00000612495 578 ntBASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.1■□□□□ 0.49
SPHK2Q9NRA0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK2Q9NRA0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms