Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC096633.1-201ENST00000422446 749 ntBASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 KRT17P6-201ENST00000453795 1220 ntBASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 AC104819.1-201ENST00000504587 486 ntBASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AC074051.2-201ENST00000565115 352 ntBASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 KRT8P47-201ENST00000604727 1398 ntBASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRDM9Q9NQV7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.83■□□□□ 0.29
PRDM9Q9NQV7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PRDM9Q9NQV7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
PRDM9Q9NQV7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRDM9Q9NQV7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRDM9Q9NQV7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 AC068880.1-201ENST00000507289 2297 ntBASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRDM9Q9NQV7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms