Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 AC016734.2-201ENST00000624325 1377 ntBASIC15.6■□□□□ 0.09
CDH20Q9HBT6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CDH20Q9HBT6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.59■□□□□ 0.09
CDH20Q9HBT6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AC138028.4-201ENST00000564984 1845 ntBASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH20Q9HBT6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH20Q9HBT6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH20Q9HBT6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.58■□□□□ 0.09
CDH20Q9HBT6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH20Q9HBT6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 AC011840.4-201ENST00000578471 627 ntBASIC15.58■□□□□ 0.08
CDH20Q9HBT6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH20Q9HBT6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH20Q9HBT6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms