Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 AC009947.1-201ENST00000444350 727 ntBASIC18.34■□□□□ 0.53
BRD9Q9H8M2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 AC004967.1-201ENST00000453589 447 ntBASIC18.34■□□□□ 0.53
BRD9Q9H8M2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 AC005593.1-201ENST00000624894 515 ntBASIC18.34■□□□□ 0.53
BRD9Q9H8M2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD9Q9H8M2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD9Q9H8M2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 PMS2P2-201ENST00000425039 1128 ntBASIC18.33■□□□□ 0.52
BRD9Q9H8M2 AC004832.2-201ENST00000426397 482 ntBASIC18.33■□□□□ 0.52
BRD9Q9H8M2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 AC006557.2-201ENST00000592985 1240 ntBASIC18.33■□□□□ 0.52
BRD9Q9H8M2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 PGM5P2-202ENST00000637225 1043 ntBASIC18.33■□□□□ 0.52
BRD9Q9H8M2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRD9Q9H8M2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 AC023274.1-201ENST00000418278 595 ntBASIC18.32■□□□□ 0.52
BRD9Q9H8M2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.32■□□□□ 0.52
BRD9Q9H8M2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 PMPCAP1-201ENST00000508114 1576 ntBASIC18.32■□□□□ 0.52
BRD9Q9H8M2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRD9Q9H8M2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms