Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 AC004790.2-201ENST00000623588 572 ntBASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TDRD3Q9H7E2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
TDRD3Q9H7E2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 VN2R19P-201ENST00000442399 1052 ntBASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 SIGLEC30P-201ENST00000455569 941 ntBASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 ALG1L5P-201ENST00000482043 771 ntBASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 IGHV3-65-201ENST00000523210 341 ntBASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.01■□□□□ 0.95
TDRD3Q9H7E2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 AC003669.1-201ENST00000334569 611 ntBASIC21■□□□□ 0.95
TDRD3Q9H7E2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 LBH-203ENST00000404397 543 ntTSL 4 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 HCG4B-203ENST00000450128 991 ntBASIC21■□□□□ 0.95
TDRD3Q9H7E2 AC008667.4-201ENST00000607370 168 ntBASIC21■□□□□ 0.95
TDRD3Q9H7E2 AL513190.1-201ENST00000621254 727 ntBASIC21■□□□□ 0.95
TDRD3Q9H7E2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 AC093677.2-201ENST00000600169 1863 ntBASIC21■□□□□ 0.95
TDRD3Q9H7E2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TDRD3Q9H7E2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TDRD3Q9H7E2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 AC002310.6-201ENST00000624451 1377 ntBASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 AP006288.1-201ENST00000446065 395 ntBASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 AC018445.3-201ENST00000624177 1945 ntBASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TDRD3Q9H7E2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TDRD3Q9H7E2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms