Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 AC092329.2-201ENST00000598402 547 ntBASIC16.52■□□□□ 0.24
UBQLN3Q9H347 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 AC004263.2-201ENST00000617183 678 ntBASIC16.52■□□□□ 0.24
UBQLN3Q9H347 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBQLN3Q9H347 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN3Q9H347 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN3Q9H347 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN3Q9H347 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
UBQLN3Q9H347 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN3Q9H347 LINC01126-201ENST00000623515 1646 ntBASIC16.52■□□□□ 0.23
UBQLN3Q9H347 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
UBQLN3Q9H347 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 KRT18P1-202ENST00000452408 1331 ntBASIC16.51■□□□□ 0.23
UBQLN3Q9H347 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 AC012317.2-201ENST00000623305 2251 ntBASIC16.51■□□□□ 0.23
UBQLN3Q9H347 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 RN7SL606P-201ENST00000472779 293 ntBASIC16.51■□□□□ 0.23
UBQLN3Q9H347 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 TPSP2-201ENST00000561760 610 ntBASIC16.51■□□□□ 0.23
UBQLN3Q9H347 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN3Q9H347 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.5■□□□□ 0.23
UBQLN3Q9H347 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms