Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 AC002558.1-201ENST00000488906 803 ntBASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 HLA-J-203ENST00000494367 1087 ntBASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.27■■□□□ 1.16
CNTNAP4Q9C0A0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.15
CNTNAP4Q9C0A0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.27■■□□□ 1.15
CNTNAP4Q9C0A0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
CNTNAP4Q9C0A0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CNTNAP4Q9C0A0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 AL096828.2-201ENST00000567259 1965 ntBASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 CXCL1P1-201ENST00000502804 216 ntBASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 AC022145.2-201ENST00000598203 171 ntBASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 AC116407.2-201ENST00000613639 860 ntBASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNTNAP4Q9C0A0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 ADH5P3-201ENST00000433842 1137 ntBASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 AC093512.1-201ENST00000617969 520 ntBASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 REXO1L3P-201ENST00000622202 1288 ntBASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 AC100803.2-201ENST00000562459 1963 ntBASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.25■■□□□ 1.15
CNTNAP4Q9C0A0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 AL121761.2-201ENST00000598007 1648 ntBASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNTNAP4Q9C0A0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.23■■□□□ 1.15
CNTNAP4Q9C0A0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms