Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AC004817.3-201ENST00000602957 2129 ntBASIC18.53■□□□□ 0.56
LRRC3Q9BY71 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 SPDYE21P-201ENST00000413323 827 ntBASIC18.53■□□□□ 0.56
LRRC3Q9BY71 LAGE3P1-201ENST00000425356 484 ntBASIC18.53■□□□□ 0.56
LRRC3Q9BY71 AC103564.2-201ENST00000432853 1299 ntBASIC18.53■□□□□ 0.56
LRRC3Q9BY71 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 Z83851.2-201ENST00000609564 659 ntBASIC18.53■□□□□ 0.56
LRRC3Q9BY71 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LRRC3Q9BY71 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 KRT18P27-201ENST00000427733 1299 ntBASIC18.52■□□□□ 0.56
LRRC3Q9BY71 UNC93B6-202ENST00000528242 690 ntBASIC18.52■□□□□ 0.56
LRRC3Q9BY71 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 AC140113.2-201ENST00000604370 208 ntBASIC18.52■□□□□ 0.56
LRRC3Q9BY71 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC3Q9BY71 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC3Q9BY71 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC3Q9BY71 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC3Q9BY71 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
LRRC3Q9BY71 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC3Q9BY71 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC3Q9BY71 AIRN-201ENST00000601203 4374 ntBASIC18.51■□□□□ 0.55
LRRC3Q9BY71 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 WIZP1-201ENST00000531444 2299 ntBASIC18.51■□□□□ 0.55
LRRC3Q9BY71 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AC027601.4-201ENST00000611259 610 ntBASIC18.51■□□□□ 0.55
LRRC3Q9BY71 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 FAM197Y3-203ENST00000618346 717 ntBASIC18.51■□□□□ 0.55
LRRC3Q9BY71 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AL353593.2-201ENST00000602529 1483 ntBASIC18.51■□□□□ 0.55
LRRC3Q9BY71 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC3Q9BY71 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms