Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 AL353801.3-201ENST00000609898 542 ntBASIC12.42□□□□□ -0.42
UPK3BQ9BT76 AC124864.1-201ENST00000623408 392 ntBASIC12.42□□□□□ -0.42
UPK3BQ9BT76 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 AC233702.3-201ENST00000578656 1387 ntBASIC12.42□□□□□ -0.42
UPK3BQ9BT76 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UPK3BQ9BT76 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 TSPY12P-201ENST00000421279 868 ntBASIC12.41□□□□□ -0.42
UPK3BQ9BT76 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 GMCL1P1-201ENST00000463439 1581 ntBASIC12.41□□□□□ -0.42
UPK3BQ9BT76 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC104819.1-201ENST00000504587 486 ntBASIC12.41□□□□□ -0.42
UPK3BQ9BT76 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC011840.4-201ENST00000578471 627 ntBASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC009154.2-201ENST00000621177 724 ntBASIC12.41□□□□□ -0.42
UPK3BQ9BT76 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC073592.3-201ENST00000625118 1834 ntBASIC12.41□□□□□ -0.42
UPK3BQ9BT76 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms