Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 TNRC18P3-201ENST00000441896 2691 ntBASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 LINC00265-3P-201ENST00000447588 903 ntBASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 PRELID1P1-202ENST00000567272 903 ntBASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC090616.6-201ENST00000582640 721 ntBASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC008687.5-201ENST00000593746 558 ntBASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCGF1Q9BSM1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 SDHAP2-201ENST00000455183 2001 ntBASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 AP002383.4-201ENST00000442518 975 ntBASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 GUSBP12-201ENST00000513727 720 ntBASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 AL353692.3-201ENST00000407031 1396 ntBASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCGF1Q9BSM1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 ABALON-201ENST00000629058 1903 ntBASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms