Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.77■□□□□ 0.11
VRK1Q99986 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VRK1Q99986 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VRK1Q99986 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.76■□□□□ 0.11
VRK1Q99986 KRT18P48-201ENST00000434763 852 ntBASIC15.76■□□□□ 0.11
VRK1Q99986 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.76■□□□□ 0.11
VRK1Q99986 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.76■□□□□ 0.11
VRK1Q99986 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 AC011498.5-201ENST00000592027 486 ntBASIC15.76■□□□□ 0.11
VRK1Q99986 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.76■□□□□ 0.11
VRK1Q99986 AC068587.9-201ENST00000641814 219 ntBASIC15.76■□□□□ 0.11
VRK1Q99986 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VRK1Q99986 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VRK1Q99986 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK1Q99986 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.75■□□□□ 0.11
VRK1Q99986 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VRK1Q99986 AC084018.2-201ENST00000613093 2607 ntBASIC15.75■□□□□ 0.11
VRK1Q99986 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.75■□□□□ 0.11
VRK1Q99986 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
VRK1Q99986 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
VRK1Q99986 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.75■□□□□ 0.11
VRK1Q99986 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 GNAS-203ENST00000306120 1878 ntBASIC15.75■□□□□ 0.11
VRK1Q99986 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms