Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 VN2R19P-201ENST00000442399 1052 ntBASIC18.84■□□□□ 0.61
ZNF558Q96NG5 RPS15P9-201ENST00000494093 319 ntBASIC18.84■□□□□ 0.61
ZNF558Q96NG5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 AC005829.1-201ENST00000570002 483 ntBASIC18.84■□□□□ 0.61
ZNF558Q96NG5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 CROCCP3-202ENST00000420820 1947 ntBASIC18.84■□□□□ 0.61
ZNF558Q96NG5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF558Q96NG5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF558Q96NG5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF558Q96NG5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF558Q96NG5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF558Q96NG5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
ZNF558Q96NG5 AL096828.2-201ENST00000567259 1965 ntBASIC18.83■□□□□ 0.61
ZNF558Q96NG5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AP006288.1-201ENST00000446065 395 ntBASIC18.83■□□□□ 0.6
ZNF558Q96NG5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AC109462.3-201ENST00000573934 613 ntBASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AC008667.4-201ENST00000607370 168 ntBASIC18.83■□□□□ 0.6
ZNF558Q96NG5 AC019129.2-201ENST00000609837 1235 ntBASIC18.83■□□□□ 0.6
ZNF558Q96NG5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF558Q96NG5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 IGHV3-65-201ENST00000523210 341 ntBASIC18.82■□□□□ 0.6
ZNF558Q96NG5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 AC027796.2-201ENST00000575326 344 ntBASIC18.82■□□□□ 0.6
ZNF558Q96NG5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 AL355385.1-201ENST00000606123 409 ntBASIC18.82■□□□□ 0.6
ZNF558Q96NG5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF558Q96NG5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 AC018445.3-201ENST00000624177 1945 ntBASIC18.81■□□□□ 0.6
ZNF558Q96NG5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 HMGN1P19-201ENST00000436976 333 ntBASIC18.81■□□□□ 0.6
ZNF558Q96NG5 PRSS29P-201ENST00000440800 595 ntBASIC18.81■□□□□ 0.6
ZNF558Q96NG5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
ZNF558Q96NG5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms