Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHAMP1Q96JM3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 HTR7P1-202ENST00000624664 4411 ntBASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 AL157888.1-201ENST00000631930 593 ntBASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHAMP1Q96JM3 AC008741.2-201ENST00000612792 3115 ntBASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 HLA-J-201ENST00000462773 1622 ntBASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHAMP1Q96JM3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 MIR3180-4-201ENST00000582223 153 ntBASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AP001412.1-201ENST00000608405 714 ntBASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AC116562.4-202ENST00000641738 218 ntBASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 PCDHA14-201ENST00000506751 2298 ntBASIC20.64■□□□□ 0.89
CHAMP1Q96JM3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 AC105020.1-201ENST00000435356 2205 ntBASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 CCR12P-201ENST00000446203 998 ntBASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.63■□□□□ 0.89
CHAMP1Q96JM3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms