Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM5Q96HC4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 KRT8P26-201ENST00000534154 1276 ntBASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 AL023806.1-201ENST00000603994 1649 ntBASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM5Q96HC4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 BCL2-203ENST00000589955 5011 ntBASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM5Q96HC4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 AC108860.2-201ENST00000562760 2183 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms