Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDCA5Q96FF9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDCA5Q96FF9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 CXCL1P1-201ENST00000502804 216 ntBASIC20.7■□□□□ 0.9
CDCA5Q96FF9 STK19B-204ENST00000512515 211 ntBASIC20.7■□□□□ 0.9
CDCA5Q96FF9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 STK25P1-201ENST00000585406 838 ntBASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA5Q96FF9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 AC092919.2-201ENST00000623631 1645 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 LINC00982-205ENST00000420957 435 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 AJ011932.1-201ENST00000621707 465 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 AL035252.4-201ENST00000624174 288 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 Z92544.3-201ENST00000624747 417 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 PHGDH-209ENST00000641074 1780 ntBASIC20.69■□□□□ 0.9
CDCA5Q96FF9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA5Q96FF9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 AC006116.8-202ENST00000587620 1550 ntBASIC20.68■□□□□ 0.9
CDCA5Q96FF9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 DUX4L27-201ENST00000554796 1261 ntBASIC20.68■□□□□ 0.9
CDCA5Q96FF9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 AC005332.7-201ENST00000614046 2005 ntBASIC20.68■□□□□ 0.9
CDCA5Q96FF9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA5Q96FF9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA5Q96FF9 AC015922.1-201ENST00000421102 1152 ntBASIC20.67■□□□□ 0.9
CDCA5Q96FF9 AC005034.1-201ENST00000426657 489 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms