Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD4Q96DM1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.27■□□□□ 0.68
PGBD4Q96DM1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD4Q96DM1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD4Q96DM1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PGBD4Q96DM1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD4Q96DM1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.27■□□□□ 0.67
PGBD4Q96DM1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PGBD4Q96DM1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PGBD4Q96DM1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PGBD4Q96DM1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 HLA-J-201ENST00000462773 1622 ntBASIC19.26■□□□□ 0.67
PGBD4Q96DM1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 COX5BP2-201ENST00000392354 334 ntBASIC19.26■□□□□ 0.67
PGBD4Q96DM1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 RPL13AP23-201ENST00000480739 586 ntBASIC19.26■□□□□ 0.67
PGBD4Q96DM1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 MTDHP4-201ENST00000600287 670 ntBASIC19.26■□□□□ 0.67
PGBD4Q96DM1 AC023511.2-201ENST00000618803 211 ntBASIC19.26■□□□□ 0.67
PGBD4Q96DM1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 ZNF259P1-201ENST00000407656 1365 ntBASIC19.26■□□□□ 0.67
PGBD4Q96DM1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PGBD4Q96DM1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 KRT18P58-201ENST00000527480 1120 ntBASIC19.25■□□□□ 0.67
PGBD4Q96DM1 AL671883.3-201ENST00000603274 991 ntBASIC19.25■□□□□ 0.67
PGBD4Q96DM1 AC025062.2-201ENST00000605477 670 ntBASIC19.25■□□□□ 0.67
PGBD4Q96DM1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PGBD4Q96DM1 WIZP1-201ENST00000531444 2299 ntBASIC19.25■□□□□ 0.67
PGBD4Q96DM1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 AL096828.2-201ENST00000567259 1965 ntBASIC19.24■□□□□ 0.67
PGBD4Q96DM1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 PMPCAP1-201ENST00000508114 1576 ntBASIC19.24■□□□□ 0.67
PGBD4Q96DM1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 AD001527.2-201ENST00000622994 785 ntBASIC19.24■□□□□ 0.67
PGBD4Q96DM1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.24■□□□□ 0.67
PGBD4Q96DM1 AC104581.1-202ENST00000635932 2618 ntBASIC19.24■□□□□ 0.67
PGBD4Q96DM1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms