Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNRNP40Q96DI7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SNRNP40Q96DI7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 CNN2P11-201ENST00000429351 262 ntBASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AC108073.2-201ENST00000464002 357 ntBASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AL513190.1-201ENST00000621254 727 ntBASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SNRNP40Q96DI7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRNP40Q96DI7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SNRNP40Q96DI7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRNP40Q96DI7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNRNP40Q96DI7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SNRNP40Q96DI7 ESPNP-201ENST00000270691 2015 ntBASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 COX5BP2-201ENST00000392354 334 ntBASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 AL645939.2-201ENST00000427340 991 ntBASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 HCG4B-203ENST00000450128 991 ntBASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNRNP40Q96DI7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 MKNK2P1-201ENST00000437526 628 ntBASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 AP002472.1-201ENST00000577490 586 ntBASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 AL078644.1-201ENST00000609881 752 ntBASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 SIRPAP1-201ENST00000448467 1770 ntBASIC15.94■□□□□ 0.14
SNRNP40Q96DI7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms