Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 AP000525.1-201ENST00000608286 694 ntBASIC17.15■□□□□ 0.34
VPS33AQ96AX1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS33AQ96AX1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
VPS33AQ96AX1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VPS33AQ96AX1 CROCCP1-201ENST00000426910 5675 ntBASIC17.14■□□□□ 0.34
VPS33AQ96AX1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VPS33AQ96AX1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VPS33AQ96AX1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
VPS33AQ96AX1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS33AQ96AX1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.13■□□□□ 0.33
VPS33AQ96AX1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS33AQ96AX1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS33AQ96AX1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms